RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PAK5Q9P286 719 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 BARX2Q9UMQ3 279 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 THRAP10827 490 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 MGAT1P26572 445 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 NT5C2P49902 561 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 NAGLUP54802 743 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 GTF2BQ00403 316 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 NR1D2Q14995 579 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 CES4AQ5XG92 561 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 HEATR4Q86WZ0 1026 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 NKD2Q969F2 451 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 ZNF669Q96BR6 464 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 PLGRKTQ9HBL7 147 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 ZNF229Q9UJW7 825 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 AP4E1Q9UPM8 1137 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 DGKBQ9Y6T7 804 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 PDLIM1O00151 329 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 CHRNGP07510 517 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 MMP8P22894 467 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 ADORA2AP29274 412 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 BFSP2Q13515 415 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 TKFCQ3LXA3 575 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 IL23RQ5VWK5 629 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 KCNT2Q6UVM3 1135 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 ZNF677Q86XU0 584 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 SULF1Q8IWU6 871 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 OMDQ99983 421 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 ING2Q9H160 280 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 TIMMDC1Q9NPL8 285 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 UBP1Q9NZI7 540 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 DAPK2Q9UIK4 370 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 SDR42E2A6NKP2 422 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 APOL1O14791 398 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 PHGDHO43175 533 aaKnown RBP16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 COQ9O75208 318 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 KCNH1O95259 989 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 PIK3R1P27986 724 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 GARSP41250 739 aaKnown RBP16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 PLK1P53350 603 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 PLIN5Q00G26 463 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 OLIG2Q13516 323 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 OTUD3Q5T2D3 398 aaPredicted RBP16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 PRR5LQ6MZQ0 368 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 SLC7A5P1Q8MH63 180 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 CATSPER1Q8NEC5 780 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 SLC35B2Q8TB61 432 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 CCDC138Q96M89 665 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 EFHD1Q9BUP0 239 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 CACNA1SQ13698 1873 aa16.33■□□□□ 0.21
PRPF40B-201ENST00000261897 ATP6AP2A0A1C7CYW4 349 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 ATP6AP2O75787 350 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 TNFSF9P41273 254 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 SLC18A1P54219 525 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 ABCE1P61221 599 aaKnown RBP16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 LSM3P62310 102 aaKnown RBP16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 FOXD4Q12950 439 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 KIF19Q2TAC6 998 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 TMEM110Q86TL2 294 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 AMIGO3Q86WK7 504 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 RYBPQ8N488 228 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 SMYD1Q8NB12 490 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 LZICQ8WZA0 190 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 DCPSQ96C86 337 aaKnown RBP16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 APBA2Q99767 749 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 GLIS2Q9BZE0 524 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 PCDH12Q9NPG4 1184 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 RNF19AQ9NV58 838 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 PTPRJQ12913 1337 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 SPATA31A1Q5TZJ5 1347 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 KIF13AQ9H1H9 1805 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 ZBTB14O43829 449 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 TSPAN8P19075 237 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 HDCP19113 662 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 TM4SF1P30408 202 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 NUP107P57740 925 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 SLC12A1Q13621 1099 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 RPS6KA2Q15349 733 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 ZIK1Q3SY52 487 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 PTPN20Q4JDL3 420 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 GLRA4Q5JXX5 417 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 TFAP2BQ92481 460 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 NGLY1Q96IV0 654 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 NLRP4Q96MN2 994 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 UPF3AQ9H1J1 476 aaKnown RBP16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 XPNPEP3Q9NQH7 507 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 CDY2AQ9Y6F7 541 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 CDY1Q9Y6F8 540 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 FER1L4A9Z1Z3 1794 aa16.33■□□□□ 0.2
PRPF40B-201ENST00000261897 TOR1BO14657 336 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 GAKO14976 1311 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 GLRA3O75311 464 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 CDH2P19022 906 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 TBXAS1P24557 533 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 JAG1P78504 1218 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 HSF5Q4G112 596 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 SLC10A5Q5PT55 438 aa16.32■□□□□ 0.2
PRPF40B-201ENST00000261897 BBS12Q6ZW61 710 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms