RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 PFKPQ01813 784 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 ELAVL2Q12926 359 aaKnown RBP12.45□□□□□ -0.42
SPG11-201ENST00000261866 XRCC4Q13426 336 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 NTRK3Q16288 839 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 MMGT1Q8N4V1 131 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 KAT5Q92993 513 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 TMEM159Q96B96 161 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 ZNF558Q96NG5 402 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.45□□□□□ -0.42
SPG11-201ENST00000261866 MRPS23Q9Y3D9 190 aaKnown RBP12.45□□□□□ -0.42
SPG11-201ENST00000261866 C16orf46Q6P387 395 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 LRRC34Q8IZ02 419 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 CYP4X1Q8N118 509 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 OR6K2Q8NGY2 324 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 CMTM5Q96DZ9 223 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 ACKR2O00590 384 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 PROSCO94903 275 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 VAPBO95292 243 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 FLT3LGP49771 235 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 AMPD2Q01433 879 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 PRKAA1Q13131 559 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 TAF2Q6P1X5 1199 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 DNAJC14Q6Y2X3 702 aaPredicted RBP12.45□□□□□ -0.42
SPG11-201ENST00000261866 GET4Q7L5D6 327 aaPredicted RBP12.45□□□□□ -0.42
SPG11-201ENST00000261866 SH3BP5LQ7L8J4 393 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 SYN2Q92777 582 aaPredicted RBP12.45□□□□□ -0.42
SPG11-201ENST00000261866 TBL1YQ9BQ87 522 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 MRPL9Q9BYD2 267 aaKnown RBP12.45□□□□□ -0.42
SPG11-201ENST00000261866 HEY2Q9UBP5 337 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 ZNF112Q9UJU3 913 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 VPS9D1Q9Y2B5 631 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 MAP2P11137 1827 aaKnown RBP12.45□□□□□ -0.42
SPG11-201ENST00000261866 A0A0A6YYK5 440 aaPredicted RBP12.45□□□□□ -0.42
SPG11-201ENST00000261866 MEI4A8MW99 385 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 SERPINF2P08697 491 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 ATP6V1B2P21281 511 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 KRT20P35900 424 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 SERPINB4P48594 390 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 CASP5P51878 434 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 BTN2A1Q7KYR7 527 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 C7orf61Q8IZ16 206 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 EXD1Q8NHP7 514 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 PARVBQ9HBI1 364 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 KLC4Q9NSK0 619 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 NR2E3Q9Y5X4 410 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 TRPC5OSA6NMA1 111 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 RGS5O15539 181 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 KLHL2O95198 593 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 IGSF6O95976 241 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 ABL2P42684 1182 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 WASP42768 502 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 FIBCD1Q8N539 461 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 ACTL9Q8TC94 416 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 AASDHPPTQ9NRN7 309 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 DCDC2Q9UHG0 476 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 FAM50BQ9Y247 325 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 SCAMP1O15126 338 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 CCL16O15467 120 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 KLHL18O94889 574 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 FAM107AO95990 144 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 PIRTP0C851 137 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 ATP12AP54707 1039 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 CSNK2BP67870 215 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 TRIP4Q15650 581 aaPredicted RBP12.45□□□□□ -0.42
SPG11-201ENST00000261866 INSCQ1MX18 579 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 TPD52L3Q96J77 140 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 TMEM245Q9H330 911 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 MARCH2Q9P0N8 246 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 ARHGAP20Q9P2F6 1191 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 HAO1Q9UJM8 370 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 ST3GAL5Q9UNP4 418 aa12.45□□□□□ -0.42
SPG11-201ENST00000261866 MTO1Q9Y2Z2 717 aaKnown RBP12.45□□□□□ -0.42
SPG11-201ENST00000261866 RNF103O00237 685 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 SPAG6O75602 509 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 FLT3P36888 993 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 HNF4AP41235 474 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 PLA2G4EQ3MJ16 856 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 RGS18Q9NS28 235 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 DPP7Q9UHL4 492 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 PCDHGA4Q9Y5G9 962 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 CCR4P51679 360 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 MPP3Q13368 585 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 NR6A1Q15406 480 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 NT5DC4Q86YG4 428 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 TRPC4APQ8TEL6 797 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 COL26A1Q96A83 441 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 MTERF3Q96E29 417 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 CYP3A43Q9HB55 503 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 ZNF541Q9H0D2 1346 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 TRIM66O15016 1216 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 MTA2O94776 668 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 PTPN1P18031 435 aaKnown RBP12.44□□□□□ -0.42
SPG11-201ENST00000261866 MAGEA9P43362 315 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 ZNF470Q6ECI4 717 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 RIOX2Q8IUF8 465 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 WDR18Q9BV38 432 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 CDC42EP4Q9H3Q1 356 aaKnown RBP12.44□□□□□ -0.42
SPG11-201ENST00000261866 ARHGEF3Q9NR81 526 aa12.44□□□□□ -0.42
SPG11-201ENST00000261866 TBC1D13Q9NVG8 400 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms