RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 NT5C1AQ9BXI3 368 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 RNPEPQ9H4A4 650 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 PTPRFP10586 1907 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 ATXN3P54252 364 aaPredicted RBP14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 ASPHQ12797 758 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 SLC10A2Q12908 348 aaPredicted RBP14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 OLIG2Q13516 323 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 TMEM132DQ14C87 1099 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 TAZQ16635 292 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 RASSF3Q86WH2 238 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 FAM131BQ86XD5 332 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 ADGRF2Q8IZF7 708 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 GSDMBQ8TAX9 411 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 NDRG1Q92597 394 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 FAM136AQ96C01 138 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 MOCOSQ96EN8 888 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 EBNA1BP2Q99848 306 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 PLAC1Q9HBJ0 212 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 HESX1Q9UBX0 185 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 ZNF212Q9UDV6 495 aa14.92□□□□□ -0.02
SFSWAP-201ENST00000261674 USP12O75317 370 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 DESP17661 470 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 ICAM3P32942 547 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 MLH1P40692 756 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 BIRC2Q13490 618 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 LPCAT4Q643R3 524 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 TSHZ1Q6ZSZ6 1077 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 CYP4V2Q6ZWL3 525 aaPredicted RBP14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 SESTD1Q86VW0 696 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 TNS4Q8IZW8 715 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 PGBD4Q96DM1 585 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 FAM167AQ96KS9 214 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 TRIM4Q9C037 500 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 NRDE2Q9H7Z3 1164 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 IFT122Q9HBG6 1241 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 BARX2Q9UMQ3 279 aaPredicted RBP14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 IGKV6D-21A0A0A0MT36 114 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 HMX2A2RU54 273 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 TPP1O14773 563 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 TM7SF2O76062 418 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 STK10O94804 968 aaKnown RBP14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 TYK2P29597 1187 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 VEGFBP49765 207 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 FLT3LGP49771 235 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 SPDYAQ5MJ70 313 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 AP1ARQ63HQ0 302 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 SIGLEC10Q96LC7 697 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 TINF2Q9BSI4 451 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 BCO2Q9BYV7 579 aa14.91□□□□□ -0.02
SFSWAP-201ENST00000261674 DNAJC25-GNG10A0A024R161 153 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 MAGEA13PA6NCF6 341 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 PGK1P00558 417 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 SMPD1P17405 629 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 MGAT1P26572 445 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 SLC1A6P48664 564 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 PRKCZQ05513 592 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 SLC10A6Q3KNW5 377 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 PPP4R1Q8TF05 950 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 NLRP7Q8WX94 980 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 ATP2A3Q93084 1043 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 C7orf26Q96N11 449 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 DPP3Q9NY33 737 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 PSAT1Q9Y617 370 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 ERVK-10P10266 1014 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 ITGA9Q13797 1035 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 TTLL4Q14679 1199 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 ZNF792Q3KQV3 632 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 GPR20Q99678 358 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 THAP1Q9NVV9 213 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 CAPN14A8MX76 684 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 A8MXQ7 604 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 CREB3O43889 395 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 MSX2P35548 267 aaPredicted RBP14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 DSG1Q02413 1049 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 USP4Q13107 963 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 TRMT5Q32P41 509 aaKnown RBP14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 CMC1Q7Z7K0 106 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 C10orf107Q8IVU9 208 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 PIWIL2Q8TC59 973 aaKnown RBP14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 SH3GL3Q99963 347 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 CXCL16Q9H2A7 254 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 MMADHCQ9H3L0 296 aaPredicted RBP14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 TMPRSS4Q9NRS4 437 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 SIRPGQ9P1W8 387 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 SOX13Q9UN79 622 aa14.9□□□□□ -0.02
SFSWAP-201ENST00000261674 E9PBE3 544 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 TRDMT1O14717 391 aaKnown RBP14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 PPEF2O14830 753 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 KLHL41O60662 606 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 IL18RAPO95256 599 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 TSHRP16473 764 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 CUL3Q13618 768 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 PDK2Q15119 407 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 GRAMD1BQ3KR37 738 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 DNAL1Q4LDG9 190 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 RABGAP1LQ5R372 815 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 OR52E8Q6IFG1 317 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 CD99L2Q8TCZ2 262 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 TUBGCP5Q96RT8 1024 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms