RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 DGKAP23743 735 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 HSD17B2P37059 387 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 GRM5P41594 1212 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 CXCL9Q07325 125 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 C1DQ13901 141 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 LRRC23Q53EV4 343 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ZC3H18Q86VM9 953 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ZFPM1Q8IX07 1006 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 LRRC43Q8N309 656 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 C17orf53Q8N3J3 647 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 WNT8BQ93098 351 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 EIF2B3Q9NR50 452 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 CACNA2D2Q9NY47 1150 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ASB3Q9Y575 518 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ZNF487B1APH4 448 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 CFLARO15519 480 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PRPF4O43172 522 aaKnown RBP eCLIP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 EOMESO95936 686 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 NFKB1P19838 968 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TM4SF1P30408 202 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 OR1G1P47890 313 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ZNF280AP59817 542 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 CHRNB3Q05901 458 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SPPL2BQ8TCT7 592 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 APOPT1Q96IL0 206 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 YME1L1Q96TA2 773 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 IRX2Q9BZI1 471 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PCBD2Q9H0N5 130 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TMBIM4Q9HC24 238 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 USP20Q9Y2K6 914 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SYNDIG1LA6NDD5 238 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TFRCP02786 760 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PTPRAP18433 802 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 YWHAQP27348 245 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SERPINA4P29622 427 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ABL2P42684 1182 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 GUCA1AP43080 201 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SCNN1GP51170 649 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ACVR2BQ13705 512 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PARP15Q460N3 678 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 CAPN12Q6ZSI9 719 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 NT5DC3Q86UY8 548 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SNX31Q8N9S9 440 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PRICKLE1Q96MT3 831 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TBC1D23Q9NUY8 699 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TMCC3Q9ULS5 477 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TMEM120BA0PK00 339 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 KLHL33A6NCF5 533 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 C1QTNF3-AMACRE9PGA6 284 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 MTA2O94776 668 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 CDC16Q13042 620 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SAMD4BQ5PRF9 694 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PDE12Q6L8Q7 609 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 AFTPHQ6ULP2 937 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ANKRD52Q8NB46 1076 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ACTRT2Q8TDY3 377 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 WDR24Q96S15 920 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SEPT5Q99719 369 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 UGT2B28Q9BY64 529 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 NRDE2Q9H7Z3 1164 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PARVBQ9HBI1 364 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 CASS4Q9NQ75 786 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 RPS6KL1Q9Y6S9 549 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 A0A0A0MRY4 1105 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 DAB1O75553 588 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 RASSF9O75901 435 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 RHOBTB1O94844 696 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 LAG3P18627 525 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PTX3P26022 381 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SESN3P58005 492 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 RFTN1Q14699 578 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ATAD3BQ5T9A4 648 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 GRAMD4Q6IC98 578 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SV2AQ7L0J3 742 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SPATA13Q96N96 652 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 NFKBIZQ9BYH8 718 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 DHX33Q9H6R0 707 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TAGLN3Q9UI15 199 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 POLIQ9UNA4 740 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ITGB4P16144 1822 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SLC37A4O43826 429 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ERN1O75460 977 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 H2AFXP16104 143 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 NPR3P17342 541 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 NIPAL1Q6NVV3 410 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 LRRC8DQ7L1W4 858 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 KRT73Q86Y46 540 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PDCD6IPQ8WUM4 868 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 CPA5Q8WXQ8 436 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 LRRC1Q9BTT6 524 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 LRRC19Q9H756 370 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 UBA2Q9UBT2 640 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 HBS1LQ9Y450 684 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 BBIP1A8MTZ0 92 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 ABLIM1O14639 778 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 PDE9AO76083 593 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 LTFP02788 710 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 PFKMP08237 780 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 CKBP12277 381 aa4.41□□□□□ -1.7
VPS13C-202ENST00000261517 CHN1P15882 459 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms