RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ITGA9Q13797 1035 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 ZCCHC23Q6ZST2 131 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 ITIH5Q86UX2 942 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 HEATR4Q86WZ0 1026 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 OR8H2Q8N162 312 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 HNRNPLLQ8WVV9 542 aaKnown RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 MTG1Q9BT17 334 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 POMKQ9H5K3 350 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 MID1IP1Q9NPA3 183 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 RAMP2O60895 175 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 ADORA2AP29274 412 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 CD151P48509 253 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 TYW3Q6IPR3 259 aaKnown RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 SYTL1Q8IYJ3 562 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.38□□□□□ -0.43
COL8A1-201ENST00000261037 PPP1R14AQ96A00 147 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 APBA2Q99767 749 aa12.38□□□□□ -0.43
COL8A1-201ENST00000261037 FAM47E-STBD1D6RA91 191 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 H3BQF6 201 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 SCAMP3O14828 347 aaKnown RBP12.37□□□□□ -0.43
COL8A1-201ENST00000261037 UBOX5O94941 541 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 CNTFP26441 200 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 TRIM16LQ309B1 348 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 TLK2Q86UE8 772 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 FNDC5Q8NAU1 212 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 SMARCD1Q96GM5 515 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 DPY30Q9C005 99 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 EHD4Q9H223 541 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 BATF3Q9NR55 127 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 NCKIPSDQ9NZQ3 722 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 SLITRK3O94933 977 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 KRT75O95678 551 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 PGAM1P18669 254 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 CYP2A7P20853 494 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 MRPS35P82673 323 aaKnown RBP12.37□□□□□ -0.43
COL8A1-201ENST00000261037 GRTP1Q5TC63 336 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 CNPY4Q8N129 248 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 DNERQ8NFT8 737 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 TMEM79Q9BSE2 394 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 FAM25AB3EWG3 89 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 FAM25CB3EWG5 89 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 FAM25GB3EWG6 89 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 ANKRD63C9JTQ0 380 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 YWHAQP27348 245 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 AADACL2Q6P093 401 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 DNAJC14Q6Y2X3 702 aaPredicted RBP12.37□□□□□ -0.43
COL8A1-201ENST00000261037 TPGS1Q6ZTW0 290 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 SLC22A9Q8IVM8 553 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 DEFB106AQ8N104 65 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 HTR3CQ8WXA8 447 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 ZNF606Q8WXB4 792 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 DTNBP1Q96EV8 351 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 KAZALD1Q96I82 304 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 TMEM237Q96Q45 408 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 RIOX1Q9H6W3 641 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 VTA1Q9NP79 307 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 NDOR1Q9UHB4 597 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 ATP6V1HQ9UI12 483 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 TCRBV5S4A2TA0A5A2 114 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 TM9SF1O15321 606 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 SSTR1P30872 391 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 GUCA1AP43080 201 aaPredicted RBP12.37□□□□□ -0.43
COL8A1-201ENST00000261037 MCL1Q07820 350 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 FNDC3BQ53EP0 1204 aaKnown RBP12.37□□□□□ -0.43
COL8A1-201ENST00000261037 ZNF470Q6ECI4 717 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 TMEM26Q6ZUK4 368 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 NMD3Q96D46 503 aaKnown RBP12.37□□□□□ -0.43
COL8A1-201ENST00000261037 CXorf56Q9H5V9 222 aa12.37□□□□□ -0.43
COL8A1-201ENST00000261037 PSMD12O00232 456 aaPredicted RBP12.36□□□□□ -0.43
COL8A1-201ENST00000261037 SEC22BO75396 215 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 BDNFP23560 247 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 ADCYAP1R1P41586 468 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 TMED10P49755 219 aaKnown RBP12.36□□□□□ -0.43
COL8A1-201ENST00000261037 DET1Q7L5Y6 550 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 RNF148Q8N7C7 305 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 REPS2Q8NFH8 660 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 MTMR8Q96EF0 704 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 PNMA5Q96PV4 448 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 COMMD8Q9NX08 183 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 ZNF112Q9UJU3 913 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 SNTNA6NMZ2 147 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 PDZK1P1A8MUH7 402 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 ABCG1P45844 678 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 YWHAZP63104 245 aaKnown RBP12.36□□□□□ -0.43
COL8A1-201ENST00000261037 CNTN2Q02246 1040 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 GRIK3Q13003 919 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 SGCGQ13326 291 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 NPNTQ6UXI9 565 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 FBXO39Q8N4B4 442 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 SPPL2AQ8TCT8 520 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 ANKZF1Q9H8Y5 726 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 PARVBQ9HBI1 364 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 TMEM39AQ9NV64 488 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 TUBGCP4Q9UGJ1 667 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 RAD54BQ9Y620 910 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 AP5Z1O43299 807 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 USP12O75317 370 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 KRT20P35900 424 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 IRX1P78414 480 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms