RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ABI3Q9P2A4 366 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 HEBP2Q9Y5Z4 205 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 C5P01031 1676 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 GRAP2O75791 330 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 SERPINB8P50452 374 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 ICE2Q659A1 982 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 KCNT2Q6UVM3 1135 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 ANKS1BQ7Z6G8 1248 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 DCLK2Q8N568 766 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 DBF4BQ8NFT6 615 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 RIT1Q92963 219 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 PSMC3IPQ9P2W1 217 aaPredicted RBP13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 GRID1Q9ULK0 1009 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 TRPC5OSA6NMA1 111 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 MYL2P10916 166 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 GNA13Q14344 377 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 CACHD1Q5VU97 1274 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 DEFB106AQ8N104 65 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 RNF217Q8TC41 542 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 MSANTD3Q96H12 275 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 RBM22Q9NW64 420 aaKnown RBP eCLIP13.77□□□□□ -0.216e-6■■□□□ 14.1
PRPF38A-201ENST00000257181 C4AP0C0L4 1744 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 SMIM28A0A1B0GU29 152 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 SNUPNO95149 360 aaKnown RBP13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 SNRPAP09012 282 aaKnown RBP13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 COMTP21964 271 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 CYP2F1P24903 491 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 XRCC4Q13426 336 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 MEA1Q16626 185 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 PLAGL2Q9UPG8 496 aa13.77□□□□□ -0.21
PRPF38A-201ENST00000257181 ASTN2O75129 1339 aaPredicted RBP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 PRR23AA6NEV1 266 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 FAM47DPA6NHR8 397 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 CES2O00748 559 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 TLR5O60602 858 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 TRUB2O95900 331 aaKnown RBP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 TIMP1P01033 207 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 C8AP07357 584 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 PABPC1P11940 636 aaKnown RBP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 MZF1P28698 734 aaPredicted RBP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 RAP1GAPP47736 663 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 EPM2AIP1Q7L775 607 aaPredicted RBP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 PABPC3Q9H361 631 aaKnown RBP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 TRABDQ9H4I3 376 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 NSUN3Q9H649 340 aaKnown RBP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 NT5MQ9NPB1 228 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 STOML1Q9UBI4 398 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 TIMM13Q9Y5L4 95 aaPredicted RBP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 CDY1Q9Y6F8 540 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 A0A0U1RQF3 1178 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 CATP04040 527 aaKnown RBP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 UQCRBP14927 111 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 LIG3P49916 1009 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 NCALDP61601 193 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 POU4F1Q01851 419 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 RMND5AQ9H871 391 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 SMPD4Q9NXE4 827 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 RASA4BC9J798 803 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 ENC1O14682 589 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 PER2O15055 1255 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 RASA4O43374 803 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 SCNN1BP51168 640 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 C2orf54Q08AI8 447 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 RASGRP2Q7LDG7 609 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 MCOLN2Q8IZK6 566 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 LPCAT1Q8NF37 534 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 STK32AQ8WU08 396 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 DNAAF2Q9NVR5 837 aaKnown RBP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 CFAP97Q9P2B7 532 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 ANKRD6Q9Y2G4 727 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 SNX24Q9Y343 169 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 SIGLEC16A6NMB1 481 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 C22orf31O95567 290 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 TOB1P50616 345 aaPredicted RBP13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 MPP3Q13368 585 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 KBTBD12Q3ZCT8 623 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 NUDCD3Q8IVD9 361 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 GNPTGQ9UJJ9 305 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 VAV3Q9UKW4 847 aa13.76□□□□□ -0.21
PRPF38A-201ENST00000257181 SPANXN3Q5MJ09 141 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 NT5DC1Q5TFE4 455 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 LRIG3Q6UXM1 1119 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 SPOCD1Q6ZMY3 1216 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 ALG6Q9Y672 507 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 RAD51BO15315 384 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 IFNA14P01570 189 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 PLEKP08567 350 aaPredicted RBP13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 JAK1P23458 1154 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 DGKAP23743 735 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 CAP1Q01518 475 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 KSR1Q8IVT5 923 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 CCNYL1Q8N7R7 359 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 DNAJC7Q99615 494 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 PDZD7Q9H5P4 517 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 DCDC2Q9UHG0 476 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 AP3M1Q9Y2T2 418 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 PTPRJQ12913 1337 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 A0A0B4J269 797 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms