RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 PGM1P36871 562 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 PLEKHA7Q6IQ23 1121 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 IARS2Q9NSE4 1012 aaKnown RBP15.4■□□□□ 0.06
UBE4B-201ENST00000253251 OR12D3Q9UGF7 316 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 DDX20Q9UHI6 824 aaKnown RBP15.4■□□□□ 0.06
UBE4B-201ENST00000253251 SCOCQ9UIL1 159 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 TMEM191CA6NGB0 347 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 ELK3P41970 407 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 XRCC4Q13426 336 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 LGI2Q8N0V4 545 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 ZSWIM2Q8NEG5 633 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 ATXN3LQ9H3M9 355 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 SEMA4AQ9H3S1 761 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 UBA2Q9UBT2 640 aaPredicted RBP15.4■□□□□ 0.06
UBE4B-201ENST00000253251 PLA2G4CQ9UP65 541 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 ZNF536O15090 1300 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 SYF2O95926 243 aaKnown RBP15.39■□□□□ 0.05
UBE4B-201ENST00000253251 ASGR1P07306 291 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 JAM2P57087 298 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 ITIH4Q14624 930 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 OLFML2BQ68BL8 750 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 SIAH1Q8IUQ4 282 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 FAM111AQ96PZ2 611 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 SNRNP25Q9BV90 132 aaKnown RBP15.39■□□□□ 0.05
UBE4B-201ENST00000253251 CCT8L1PA6NM43 557 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 LIASO43766 372 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 IGSF6O95976 241 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 HTR7P34969 479 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 CD151P48509 253 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 IFNL1Q8IU54 200 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 ELMO3Q96BJ8 720 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 CASS4Q9NQ75 786 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.39■□□□□ 0.05
UBE4B-201ENST00000253251 CAND2O75155 1236 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 NOVP48745 357 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 ALDH18A1P54886 795 aaKnown RBP15.39■□□□□ 0.05
UBE4B-201ENST00000253251 POU4F1Q01851 419 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 HGSNATQ68CP4 663 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 PSTKQ8IV42 348 aaKnown RBP15.39■□□□□ 0.05
UBE4B-201ENST00000253251 FIBCD1Q8N539 461 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 MIPOL1Q8TD10 442 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 STK32AQ8WU08 396 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 IRGQQ8WZA9 623 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 CPNE1Q99829 537 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 NMRK1Q9NWW6 199 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 MORF4L1Q9UBU8 362 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 FAM163BP0C2L3 166 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 ATP4AP20648 1035 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 PPP1R15BQ5SWA1 713 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 MON1AQ86VX9 555 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 SLC22A9Q8IVM8 553 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 MYO1HQ8N1T3 1032 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 MREGQ8N565 214 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 POLR1EQ9GZS1 481 aaKnown RBP15.39■□□□□ 0.05
UBE4B-201ENST00000253251 CHST7Q9NS84 486 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 ANKRD6Q9Y2G4 727 aa15.39■□□□□ 0.05
UBE4B-201ENST00000253251 O00370 1275 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 DHX15O43143 795 aaKnown RBP15.38■□□□□ 0.05
UBE4B-201ENST00000253251 TREHO43280 583 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 ADH1AP07327 375 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 CRABP2P29373 138 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 IL1RL1Q01638 556 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 CAPRIN1Q14444 709 aaKnown RBP15.38■□□□□ 0.05
UBE4B-201ENST00000253251 KCNA10Q16322 511 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 CELF6Q96J87 481 aaKnown RBP15.38■□□□□ 0.05
UBE4B-201ENST00000253251 ADAM33Q9BZ11 813 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 PHACTR1Q9C0D0 580 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 NRDE2Q9H7Z3 1164 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 GID8Q9NWU2 228 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.38■□□□□ 0.05
UBE4B-201ENST00000253251 ZSCAN5CA6NGD5 496 aaPredicted RBP15.38■□□□□ 0.05
UBE4B-201ENST00000253251 NOL4O94818 638 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 LAG3P18627 525 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 IL10P22301 178 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 HIST2H2ACQ16777 129 aaPredicted RBP15.38■□□□□ 0.05
UBE4B-201ENST00000253251 HIST2H2AA3Q6FI13 130 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 PGBD3Q8N328 593 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 NINJ2Q9NZG7 142 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 CLUHO75153 1309 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 hCG_1818297A0A087WSY0 165 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 SCNN1BP51168 640 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 PTP4A2Q12974 167 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 ALLCQ8N6M5 410 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 TBL1YQ9BQ87 522 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 C2orf49Q9BVC5 232 aaPredicted RBP15.38■□□□□ 0.05
UBE4B-201ENST00000253251 PADI3Q9ULW8 664 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 NAALADL1Q9UQQ1 740 aa15.38■□□□□ 0.05
UBE4B-201ENST00000253251 FGF19O95750 216 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 ABHD2P08910 425 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 RBL1P28749 1068 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 MMP13P45452 471 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 SLC35G1Q2M3R5 365 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 CCDC153Q494R4 210 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 FAM43BQ6ZT52 329 aaPredicted RBP15.37■□□□□ 0.05
UBE4B-201ENST00000253251 ARL8AQ96BM9 186 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 NRBF2Q96F24 287 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 SNX27Q96L92 541 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 CCDC138Q96M89 665 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 TEPSINQ96N21 525 aa15.37■□□□□ 0.05
UBE4B-201ENST00000253251 TTYH3Q9C0H2 523 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms