RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 SFT2D3Q587I9 215 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 TMC3Q7Z5M5 1100 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 ADCK1Q86TW2 530 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 GPBP1Q86WP2 473 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 DCP2Q8IU60 420 aaKnown RBP13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 HCAR2Q8TDS4 363 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 LARP4BQ92615 738 aaKnown RBP13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 TEX13BQ9BXU2 312 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 PRRG3Q9BZD7 231 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 MOCS1Q9NZB8 636 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 LIMA1Q9UHB6 759 aaKnown RBP13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 SERPINB13Q9UIV8 391 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 PDS5AQ29RF7 1337 aaKnown RBP13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 LRRC53A6NM62 1247 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 MEI4A8MW99 385 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 GSNP06396 782 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 AKR1B1P15121 316 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 UBE3AQ05086 875 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 ADGRG6Q86SQ4 1221 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 SCUBE3Q8IX30 993 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 ACTRT1Q8TDG2 376 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 CUEDC1Q9NWM3 386 aaPredicted RBP13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 CPNE7Q9UBL6 633 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 CHKBQ9Y259 395 aa13.71□□□□□ -0.21
COLGALT1-201ENST00000252599 RCCD1A6NED2 376 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 NFIBO00712 420 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 GSTM1P09488 218 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 CCNE1P24864 410 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 MMP13P45452 471 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 KCNJ5P48544 419 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 TNFAIP2Q03169 654 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 SP140Q13342 867 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 IL17AQ16552 155 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 GALNTL6Q49A17 601 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 TTC33Q6PID6 262 aaPredicted RBP13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 NEDD1Q8NHV4 660 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 SMG7Q92540 1137 aaKnown RBP13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 GJD4Q96KN9 370 aaPredicted RBP13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 ALPK1Q96QP1 1244 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 C1orf50Q9BV19 199 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 PPM1HQ9ULR3 514 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 INPP5FQ9Y2H2 1132 aa13.71□□□□□ -0.22
COLGALT1-201ENST00000252599 TTLL8A6PVC2 850 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 PROS1P07225 676 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 KITP10721 976 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 CDH2P19022 906 aaPredicted RBP13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 ACAT1P24752 427 aaKnown RBP13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 ATP5OP48047 213 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 PEX3P56589 373 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 RACK1P63244 317 aaKnown RBP13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 SPIRE1Q08AE8 756 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 AP3B2Q13367 1082 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 AMIGO1Q86WK6 493 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 TPH2Q8IWU9 490 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 TEX47Q8TBZ9 253 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 RMND5BQ96G75 393 aaPredicted RBP13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 PABPC3Q9H361 631 aaKnown RBP13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 MAN2B2Q9Y2E5 1009 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 NEU2Q9Y3R4 380 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 FOXO6A8MYZ6 492 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 ENPP3O14638 875 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 CYP26A1O43174 497 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 TFAP2AP05549 437 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 GLAP06280 429 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 CCNB1P14635 433 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 RPP30P78346 268 aaKnown RBP13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 CTAG1AP78358 180 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 POMZP3Q6PJE2 187 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 NSMFQ6X4W1 530 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 NET1Q7Z628 596 aaPredicted RBP13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 SEMA4AQ9H3S1 761 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 KCNQ5Q9NR82 932 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 C20orf96Q9NUD7 363 aaPredicted RBP13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 PAQR5Q9NXK6 330 aaPredicted RBP13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 RPL26L1Q9UNX3 145 aaKnown RBP13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 RPH3AQ9Y2J0 694 aaPredicted RBP13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 SQORQ9Y6N5 450 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 RGPD1P0DJD0 1748 aa13.7□□□□□ -0.22
COLGALT1-201ENST00000252599 PI4K2BG5E9Z4 385 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 M0R3G1 203 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 PSKH1P11801 424 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 ATP2B4P23634 1241 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 MTFR1Q15390 333 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 WDR44Q5JSH3 913 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 KCTD20Q7Z5Y7 419 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 ZNF410Q86VK4 478 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 KRT73Q86Y46 540 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 FAM109AQ8N4B1 249 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 GALNT11Q8NCW6 608 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 TBC1D16Q8TBP0 767 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 TMIGD2Q96BF3 282 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 DCPSQ96C86 337 aaKnown RBP13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 REXO4Q9GZR2 422 aaKnown RBP13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 ELOVL6Q9H5J4 265 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 ERVMER34-1Q9H9K5 563 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 TRMT6Q9UJA5 497 aaKnown RBP13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 GTPBP10A4D1E9 387 aaKnown RBP13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 AURKAO14965 403 aa13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 CLASP2O75122 1294 aaKnown RBP13.69□□□□□ -0.22
COLGALT1-201ENST00000252599 JRKO75564 520 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms