RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PSMB4P28070 264 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 PCBP1Q15365 356 aaKnown RBP eCLIP16.26■□□□□ 0.191e-7■□□□□ 10.7
LRFN1-201ENST00000248668 PLEKHG4Q58EX7 1191 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 STRADAQ7RTN6 431 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 P2RY11Q96G91 374 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 SIGLEC10Q96LC7 697 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 SMOQ99835 787 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 USP3Q9Y6I4 520 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 NUP205Q92621 2012 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 I6L893 689 aaPredicted RBP16.25■□□□□ 0.19
LRFN1-201ENST00000248668 COPEO14579 308 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 CBX6O95503 412 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 KRT16P08779 473 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 USP6NLQ92738 828 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 LRRC37BQ96QE4 947 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 SRPK1Q96SB4 655 aaKnown RBP16.25■□□□□ 0.19
LRFN1-201ENST00000248668 ZIC5Q96T25 663 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 APBA2Q99767 749 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 PHACTR1Q9C0D0 580 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 HAO1Q9UJM8 370 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 ARL5CA6NH57 179 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 F8W810 466 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 EEF2KO00418 725 aaKnown RBP16.25■□□□□ 0.19
LRFN1-201ENST00000248668 CHRNA1P02708 482 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 AKR1A1P14550 325 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 ZFXP17010 805 aaPredicted RBP16.25■□□□□ 0.19
LRFN1-201ENST00000248668 YY1P25490 414 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 BRCC3P46736 316 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 CRHR2Q13324 411 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 SETDB1Q15047 1291 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 C17orf99Q6UX52 265 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 FAM35AQ86V20 835 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 GRAMD1AQ96CP6 724 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 DDIT4Q9NX09 232 aa16.25■□□□□ 0.19
LRFN1-201ENST00000248668 GCATO75600 419 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 C1QAP02745 245 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 FYNP06241 537 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 NQO1P15559 274 aaKnown RBP16.24■□□□□ 0.19
LRFN1-201ENST00000248668 MGAT1P26572 445 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 CD52P31358 61 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 NOS2P35228 1153 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 GMPRP36959 345 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 RASA2Q15283 850 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 C11orf91Q3C1V1 193 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 RNF43Q68DV7 783 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 ARMC2Q8NEN0 867 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 STAMBPL1Q96FJ0 436 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 APOPT1Q96IL0 206 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 ZNF395Q9H8N7 513 aaPredicted RBP16.24■□□□□ 0.19
LRFN1-201ENST00000248668 SPATS2LQ9NUQ6 558 aaKnown RBP16.24■□□□□ 0.19
LRFN1-201ENST00000248668 STAP1Q9ULZ2 295 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 RALGAPA2Q2PPJ7 1873 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 DAB1O75553 588 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 THPOP40225 353 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 TTC39BQ5VTQ0 682 aaPredicted RBP16.24■□□□□ 0.19
LRFN1-201ENST00000248668 ZMIZ2Q8NF64 920 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 PGBD4Q96DM1 585 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 FETUBQ9UGM5 382 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 USH1CQ9Y6N9 552 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 NUMBLQ9Y6R0 609 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 B3GAT3O94766 335 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 NR2C2P49116 596 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 IRX1P78414 480 aaPredicted RBP16.24■□□□□ 0.19
LRFN1-201ENST00000248668 PID1Q7Z2X4 250 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 ZNF276Q8N554 614 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 C10orf82Q8WW14 230 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 NPY6RQ99463 290 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 EBNA1BP2Q99848 306 aaKnown RBP16.24■□□□□ 0.19
LRFN1-201ENST00000248668 GABRQQ9UN88 632 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 L3MBTL1Q9Y468 752 aa16.24■□□□□ 0.19
LRFN1-201ENST00000248668 A0A0A0MRY4 1105 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 KRT37O76014 449 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 LRPAP1P30533 357 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 TIGD5Q53EQ6 642 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 AGMOQ6ZNB7 445 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 MTDHQ86UE4 582 aaKnown RBP16.23■□□□□ 0.19
LRFN1-201ENST00000248668 STKLD1Q8NE28 680 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 ATXN7L3BQ96GX2 97 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 SPATA13Q96N96 652 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 APOL2Q9BQE5 337 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 TSSK1BQ9BXA7 367 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 TRPV2Q9Y5S1 764 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 CCDC78A2IDD5 438 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 H3BRJ5 948 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 SNRPAP09012 282 aaKnown RBP16.23■□□□□ 0.19
LRFN1-201ENST00000248668 RPL34P49207 117 aaKnown RBP16.23■□□□□ 0.19
LRFN1-201ENST00000248668 FYB2Q5VWT5 728 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 SMYD5Q6GMV2 418 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 TAF2Q6P1X5 1199 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 TLDC1Q6P9B6 456 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 RFX8Q6ZV50 586 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 NLRP9Q7RTR0 991 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 IFNL1Q8IU54 200 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 GSDMBQ8TAX9 411 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 TMEM209Q96SK2 561 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 GTF2IRD1Q9UHL9 959 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 GABRDO14764 452 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 TM9SF1O15321 606 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 ERCC2P18074 760 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 BDNFP23560 247 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms