RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 UNC5AQ6ZN44 842 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 GPRIN1Q7Z2K8 1008 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 ADAM32Q8TC27 787 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 DEPDC1BQ8WUY9 529 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 P2RY11Q96G91 374 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 EPAS1Q99814 870 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 ADAM2Q99965 735 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 RXFP1Q9HBX9 757 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 PRKAG3Q9UGI9 489 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 PCDHA11Q9Y5I1 949 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 COPEO14579 308 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 EDF1O60869 148 aaKnown RBP15.59■□□□□ 0.09
DDX49-201ENST00000247003 CYP11A1P05108 521 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 NEFHP12036 1026 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 PRKAR2AP13861 404 aaKnown RBP15.59■□□□□ 0.09
DDX49-201ENST00000247003 IGFBP6P24592 240 aaPredicted RBP15.59■□□□□ 0.09
DDX49-201ENST00000247003 ADRA1DP25100 572 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 CST5P28325 142 aaPredicted RBP15.59■□□□□ 0.09
DDX49-201ENST00000247003 ALDH3A1P30838 453 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 SERPINB9P50453 376 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 SLC20A2Q08357 652 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 LPIN1Q14693 890 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 SPRED3Q2MJR0 410 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 PARP6Q2NL67 630 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 PAN2Q504Q3 1202 aaKnown RBP15.59■□□□□ 0.09
DDX49-201ENST00000247003 CGB2Q6NT52 195 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 ZNF534Q76KX8 674 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 CCNJLQ8IV13 435 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 AGGF1Q8N302 714 aaeCLIP15.59■□□□□ 0.09
DDX49-201ENST00000247003 SMC1BQ8NDV3 1235 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 ZMIZ2Q8NF64 920 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 CDKL2Q92772 493 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 STAMBPL1Q96FJ0 436 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 KLF6Q99612 283 aaPredicted RBP15.59■□□□□ 0.09
DDX49-201ENST00000247003 PAAF1Q9BRP4 392 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 VPS11Q9H270 941 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 CSNK1G1Q9HCP0 422 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 TMPRSS4Q9NRS4 437 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 FBXW11Q9UKB1 542 aa15.59■□□□□ 0.09
DDX49-201ENST00000247003 TRIM49D1C9J1S8 452 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 I3L4J1 428 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 DCLK1O15075 740 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 MGEA5O60502 916 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 TROVE2P10155 538 aaKnown RBP eCLIP15.58■□□□□ 0.08
DDX49-201ENST00000247003 HCAR3P49019 387 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 TRIM32Q13049 653 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 FAM182AQ5T1J6 154 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 LRRC8BQ6P9F7 803 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 PRPF39Q86UA1 669 aaKnown RBP15.58■□□□□ 0.08
DDX49-201ENST00000247003 KLHDC9Q8NEP7 349 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 ZNF75CPQ92670 426 aaPredicted RBP15.58■□□□□ 0.08
DDX49-201ENST00000247003 RNF34Q969K3 372 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 SIGLEC10Q96LC7 697 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 BRD8Q9H0E9 1235 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 PRDM12Q9H4Q4 367 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 WDCPQ9H6R7 721 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 SLC40A1Q9NP59 571 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 KLHL8Q9P2G9 620 aaPredicted RBP15.58■□□□□ 0.08
DDX49-201ENST00000247003 GRID1Q9ULK0 1009 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 USH1CQ9Y6N9 552 aa15.58■□□□□ 0.08
DDX49-201ENST00000247003 CFAP73A6NFT4 308 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 HHLA1C9JL84 531 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 MTSS1O43312 755 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 DCTN3O75935 186 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 CABYRO75952 493 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 UBOX5O94941 541 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 FYNP06241 537 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 PYGBP11216 843 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 ERCC2P18074 760 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 MX2P20592 715 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 BDNFP23560 247 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 CCND3P30281 292 aaPredicted RBP15.57■□□□□ 0.08
DDX49-201ENST00000247003 BRCC3P46736 316 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 RABGGTBP53611 331 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 CACNA2D1P54289 1103 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 SLC18A2Q05940 514 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 CCDC15Q0P6D6 951 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 DSC3Q14574 896 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 OVOS1Q6IE37 1185 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 RNF180Q86T96 592 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 NAT9Q9BTE0 207 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 COLEC11Q9BWP8 271 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 WDR6Q9NNW5 1121 aaKnown RBP15.57■□□□□ 0.08
DDX49-201ENST00000247003 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.57■□□□□ 0.08
DDX49-201ENST00000247003 SDR42E2A6NKP2 422 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 F5H423 210 aaPredicted RBP15.57■□□□□ 0.08
DDX49-201ENST00000247003 M0QZQ0 153 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 CNTFP26441 200 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 PSMB4P28070 264 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 ITGA7Q13683 1181 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 FAM171BQ6P995 826 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 C4orf50Q6ZRC1 276 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 SCML4Q8N228 414 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 PDCD7Q8N8D1 485 aaKnown RBP15.57■□□□□ 0.08
DDX49-201ENST00000247003 HASPINQ8TF76 798 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 RSPH1Q8WYR4 309 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 SPOCK2Q92563 424 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 EDEM1Q92611 657 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 SERAC1Q96JX3 654 aa15.57■□□□□ 0.08
DDX49-201ENST00000247003 MANSC1Q9H8J5 431 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms