RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 CCDC22O60826 627 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 HAUS5O94927 633 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 FBXO21O94952 628 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 EPHB2P29323 1055 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 GLUD2P49448 558 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 HUNKP57058 714 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 DPYSQ14117 519 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 PAFAH1B3Q15102 231 aaKnown RBP22.58■■□□□ 1.21
RNF39-201ENST00000244360 CTC1Q2NKJ3 1217 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 CMPK2Q5EBM0 449 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 LGSNQ5TDP6 509 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 STEAP4Q687X5 459 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 TMEM86AQ8N2M4 240 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 MPP5Q8N3R9 675 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 PTPRN2Q92932 1015 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 KRT82Q9NSB4 513 aa22.58■■□□□ 1.21
RNF39-201ENST00000244360 DDX43Q9NXZ2 648 aaKnown RBP22.58■■□□□ 1.21
RNF39-201ENST00000244360 WDR91A4D1P6 747 aa22.58■■□□□ 1.2
RNF39-201ENST00000244360 MYADML2A6NDP7 307 aa22.58■■□□□ 1.2
RNF39-201ENST00000244360 MEIS3P2A8K0S8 358 aa22.58■■□□□ 1.2
RNF39-201ENST00000244360 OPHN1O60890 802 aa22.58■■□□□ 1.2
RNF39-201ENST00000244360 AKR1A1P14550 325 aa22.58■■□□□ 1.2
RNF39-201ENST00000244360 NBPF20Q3BBV1 942 aa22.58■■□□□ 1.2
RNF39-201ENST00000244360 SYPL2Q5VXT5 272 aa22.58■■□□□ 1.2
RNF39-201ENST00000244360 DENND5BQ6ZUT9 1274 aa22.58■■□□□ 1.2
RNF39-201ENST00000244360 MTBPQ96DY7 904 aa22.58■■□□□ 1.2
RNF39-201ENST00000244360 FAM111AQ96PZ2 611 aa22.58■■□□□ 1.2
RNF39-201ENST00000244360 LGMNQ99538 433 aa22.58■■□□□ 1.2
RNF39-201ENST00000244360 FAM105AQ9NUU6 356 aa22.58■■□□□ 1.2
RNF39-201ENST00000244360 M0QYT0 321 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 DUSP11O75319 330 aaKnown RBP22.57■■□□□ 1.2
RNF39-201ENST00000244360 FYNP06241 537 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 CSH1P0DML2 217 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 CSH2P0DML3 217 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 GRIA1P42261 906 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 LHX1P48742 406 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 TKTL1P51854 596 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 ARFIP2P53365 341 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 AIF1P55008 147 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 SARNPP82979 210 aaKnown RBP22.57■■□□□ 1.2
RNF39-201ENST00000244360 TAF11Q15544 211 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 HFE2Q6ZVN8 426 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 TEX9Q8N6V9 391 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 NUDCD1Q96RS6 583 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 MED10Q9BTT4 135 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 TMPRSS4Q9NRS4 437 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 PIGVQ9NUD9 493 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 MOCS1Q9NZB8 636 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 ST3GAL5Q9UNP4 418 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 MAD1L1Q9Y6D9 718 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 C9IYK1 514 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 M0QZ92 97 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 KLF11O14901 512 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 RFPL1O75677 317 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 TPBGLP0DKB5 382 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 RARBP10826 455 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 MLH1P40692 756 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 MAP3K7CLP57077 242 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 GJA9P57773 515 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 PDK1Q15118 436 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 PLEKHG4Q58EX7 1191 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 TRMT10BQ6PF06 316 aaKnown RBP22.57■■□□□ 1.2
RNF39-201ENST00000244360 FAM35AQ86V20 835 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 RFWD2Q8NHY2 731 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 NTAN1Q96AB6 310 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 SRPK1Q96SB4 655 aaKnown RBP22.57■■□□□ 1.2
RNF39-201ENST00000244360 SYT15Q9BQS2 421 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 CHST12Q9NRB3 414 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 LRRC42Q9Y546 428 aa22.57■■□□□ 1.2
RNF39-201ENST00000244360 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.57■■□□□ 1.2
RNF39-201ENST00000244360 TRPM7Q96QT4 1865 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 RNF103O00237 685 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 COPEO14579 308 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 NRP1O14786 923 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 DAOAP59103 153 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 DEUP1Q05D60 604 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 SCAPQ12770 1279 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 RAB41Q5JT25 222 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 TRIM42Q8IWZ5 723 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 P2RY11Q96G91 374 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 SMOQ99835 787 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 MTG1Q9BT17 334 aaPredicted RBP22.56■■□□□ 1.2
RNF39-201ENST00000244360 KANSL3Q9P2N6 904 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 NKX1-2Q9UD57 310 aaPredicted RBP22.56■■□□□ 1.2
RNF39-201ENST00000244360 DCTN4Q9UJW0 460 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 NR2E3Q9Y5X4 410 aa22.56■■□□□ 1.2
RNF39-201ENST00000244360 SCN10AQ9Y5Y9 1956 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 DCLK1O15075 740 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 UGT1A9O60656 530 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 KRT38O76015 456 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 ALDH1A2O94788 518 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 STK10O94804 968 aaKnown RBP22.55■■□□□ 1.2
RNF39-201ENST00000244360 LRRC8BQ6P9F7 803 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 RNF169Q8NCN4 708 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 TRPV1Q8NER1 839 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 OXNAD1Q96HP4 312 aaPredicted RBP22.55■■□□□ 1.2
RNF39-201ENST00000244360 NAF1Q96HR8 494 aaKnown RBP22.55■■□□□ 1.2
RNF39-201ENST00000244360 GAD1Q99259 594 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 TRIM56Q9BRZ2 755 aaKnown RBP22.55■■□□□ 1.2
RNF39-201ENST00000244360 ULBP1Q9BZM6 244 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms