RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 C12orf29Q8N999 325 aa18.1■□□□□ 0.49
HOXC6-201ENST00000243108 ZMIZ2Q8NF64 920 aa18.1■□□□□ 0.49
HOXC6-201ENST00000243108 SCAMP5Q8TAC9 235 aa18.1■□□□□ 0.49
HOXC6-201ENST00000243108 TMEM176AQ96HP8 235 aa18.1■□□□□ 0.49
HOXC6-201ENST00000243108 UBXN6Q9BZV1 441 aa18.1■□□□□ 0.49
HOXC6-201ENST00000243108 TNFRSF10BO14763 440 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 BEST1O76090 585 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 USP17L7P0C7H9 530 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 PYGMP11217 842 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 CCDC130P13994 396 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 HDCP19113 662 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 MAN1A1P33908 653 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 RWDD2BP57060 319 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 IFRD2Q12894 506 aaPredicted RBP18.09■□□□□ 0.49
HOXC6-201ENST00000243108 USP4Q13107 963 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 CCINQ13939 588 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 SEL1L2Q5TEA6 688 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 DENND1BQ6P3S1 775 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 MAMSTRQ6ZN01 415 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 PHLDB2Q86SQ0 1253 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 CRYBG2Q8N1P7 616 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 MSANTD3Q96H12 275 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 DDX47Q9H0S4 455 aaKnown RBP18.09■□□□□ 0.49
HOXC6-201ENST00000243108 MYO16Q9Y6X6 1858 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 CD19P15391 556 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 GSPT2Q8IYD1 628 aaKnown RBP18.09■□□□□ 0.49
HOXC6-201ENST00000243108 EIF1ADQ8N9N8 165 aaKnown RBP18.09■□□□□ 0.49
HOXC6-201ENST00000243108 TTC16Q8NEE8 873 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 SH3RF2Q8TEC5 729 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 TNIP3Q96KP6 325 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 SMOQ99835 787 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 VIPAS39Q9H9C1 493 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 FBRSL1Q9HCM7 1045 aaKnown RBP18.09■□□□□ 0.49
HOXC6-201ENST00000243108 TRPM5Q9NZQ8 1165 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 LCMT1Q9UIC8 334 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 WNT6Q9Y6F9 365 aa18.09■□□□□ 0.49
HOXC6-201ENST00000243108 MYOFQ9NZM1 2061 aa18.08■□□□□ 0.49
HOXC6-201ENST00000243108 DNAH14Q0VDD8 3507 aa18.08■□□□□ 0.49
HOXC6-201ENST00000243108 GOLGA6L10A0A0M3HER8 536 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 TMEM191CA6NGB0 347 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 OLFM2O95897 454 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 VDRP11473 427 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 PGFP49763 221 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 GSCP56915 257 aaPredicted RBP18.08■□□□□ 0.48
HOXC6-201ENST00000243108 SATB1Q01826 763 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 GUCY2DQ02846 1103 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 PPP1R15BQ5SWA1 713 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 AADACL2Q6P093 401 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 ERICH1Q86X53 443 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 NUP93Q8N1F7 819 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 ZBTB44Q8NCP5 570 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 SLC2A14Q8TDB8 520 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 HINFPQ9BQA5 517 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 MED10Q9BTT4 135 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 LINC00597Q9H2U6 94 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 EPB41L5Q9HCM4 733 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 FAM49BQ9NUQ9 324 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.08■□□□□ 0.48
HOXC6-201ENST00000243108 KIAA1257Q9ULG3 409 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 ARHGAP26Q9UNA1 814 aa18.08■□□□□ 0.48
HOXC6-201ENST00000243108 ZSCAN5CA6NGD5 496 aaPredicted RBP18.07■□□□□ 0.48
HOXC6-201ENST00000243108 OAS1P00973 400 aaKnown RBP18.07■□□□□ 0.48
HOXC6-201ENST00000243108 LMNAP02545 664 aaKnown RBP18.07■□□□□ 0.48
HOXC6-201ENST00000243108 CNGA2Q16280 664 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 EML3Q32P44 896 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 PKN3Q6P5Z2 889 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 EMBQ6PCB8 327 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 C1orf228Q6PIY5 440 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 MAATS1Q7Z4T9 603 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 UNC93AQ86WB7 457 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 SUMF1Q8NBK3 374 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 C3orf20Q8ND61 904 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 CCDC26Q8TAB7 109 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 OSCP1Q8WVF1 389 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 CASKIN2Q8WXE0 1202 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 KRT82Q9NSB4 513 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 DUS2Q9NX74 493 aaKnown RBP18.07■□□□□ 0.48
HOXC6-201ENST00000243108 IL37Q9NZH6 218 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 IP6K2Q9UHH9 426 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 STRIP2Q9ULQ0 834 aa18.07■□□□□ 0.48
HOXC6-201ENST00000243108 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.07■□□□□ 0.48
HOXC6-201ENST00000243108 O00370 1275 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 PSTPIP1O43586 416 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 AP1G2O75843 785 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 TCF3P15923 654 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 YWHAQP27348 245 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 SLC5A3P53794 718 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 CBX1P83916 185 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 NNTQ13423 1086 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 PTPN20Q4JDL3 420 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 TMEM196Q5HYL7 178 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 FSTL4Q6MZW2 842 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 DNAJC24Q6P3W2 148 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 SLC13A5Q86YT5 568 aaPredicted RBP18.06■□□□□ 0.48
HOXC6-201ENST00000243108 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.06■□□□□ 0.48
HOXC6-201ENST00000243108 SEC14L1Q92503 715 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 CAVIN3Q969G5 261 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 SMARCD1Q96GM5 515 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 SEMA4AQ9H3S1 761 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 ECT2Q9H8V3 914 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms