RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 A0A0B4J203 849 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 NOTOA8MTQ0 251 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 RASA4BC9J798 803 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 C5orf67F2Z3F1 127 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 ASAP2O43150 1006 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 RASA4O43374 803 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 PQBP1O60828 265 aaKnown RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 UBOX5O94941 541 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 TJP3O95049 919 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 APOEP02649 317 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 HRGP04196 525 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 ZCCHC18P0CG32 403 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 TPBGLP0DKB5 382 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 PLS3P13797 630 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 PCSK2P16519 638 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 GM2AP17900 193 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 MARK3P27448 753 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 CYP2C18P33260 490 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 PRCPP42785 496 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 CLCN3P51790 818 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 AP3M2P53677 418 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 SMAD3P84022 425 aaKnown RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 MLLT1Q03111 559 aaPredicted RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 FPGSQ05932 587 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 ENPEPQ07075 957 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 PPIGQ13427 754 aaKnown RBP eCLIP3.79□□□□□ -1.88e-7■■■□□ 14.9
UFM1-201ENST00000239878 PDE1CQ14123 709 aaPredicted RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 MYLK3Q32MK0 819 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 ARL13BQ3SXY8 428 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 KCTD21Q4G0X4 260 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 ZCWPW2Q504Y3 356 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 GLE1Q53GS7 698 aaKnown RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 CFAP58Q5T655 872 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 RETSATQ6NUM9 610 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 EFCAB12Q6NXP0 572 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 KLC3Q6P597 504 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 FIP1L1Q6UN15 594 aaKnown RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 TRAPPC11Q7Z392 1133 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 SNX32Q86XE0 403 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 SAMD14Q8IZD0 417 aaPredicted RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 RIBC1Q8N443 379 aaPredicted RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 C1orf127Q8N9H9 656 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 MCPH1Q8NEM0 835 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 GSDMBQ8TAX9 411 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 STARD8Q92502 1023 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 GATA6Q92908 595 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 LRRC45Q96CN5 670 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 ASIC4Q96FT7 647 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 CDK5RAP3Q96JB5 506 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 ATP6V1G3Q96LB4 118 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 CCDC43Q96MW1 224 aaKnown RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 XPO6Q96QU8 1125 aaKnown RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 NAP1L3Q99457 506 aaPredicted RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 PRPF18Q99633 342 aaKnown RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 REEP2Q9BRK0 252 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 RAB34Q9BZG1 259 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 TRIM9Q9C026 710 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 ECT2Q9H8V3 914 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 RRN3Q9NYV6 651 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 GIMAP2Q9UG22 337 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 TSR3Q9UJK0 312 aaKnown RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 SALL4Q9UJQ4 1053 aa3.79□□□□□ -1.8
UFM1-201ENST00000239878 NOC2LQ9Y3T9 749 aaKnown RBP3.79□□□□□ -1.8
UFM1-201ENST00000239878 DENND4AQ7Z401 1863 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 GTPBP10A4D1E9 387 aaKnown RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 ANKRD34BA5PLL1 514 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 ZNF185O15231 689 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 ZNF623O75123 536 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PEX11AO75192 247 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 SHBGP04278 402 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 ATP1A1P05023 1023 aaKnown RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 UBTFL6P0CB48 400 aaPredicted RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 CHRNB1P11230 501 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 CDK4P11802 303 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 VAV1P15498 845 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 CSF2RAP15509 400 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 MARCKSP29966 332 aaPredicted RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 ADCY8P40145 1251 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 ACADSBP45954 432 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PTDSS1P48651 473 aaKnown RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 NDUFA8P51970 172 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 WDR5P61964 334 aaKnown RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 GBE1Q04446 702 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 RALGDSQ12967 914 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 MXD4Q14582 209 aaPredicted RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 NR1D2Q14995 579 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 LIN52Q52LA3 116 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PDCD4Q53EL6 469 aaKnown RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 PSRC1Q6PGN9 363 aaPredicted RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 RTL10Q7L3V2 364 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 CPLX4Q7Z7G2 160 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 MAP4K3Q8IVH8 894 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 C12orf56Q8IXR9 622 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 IQCKQ8N0W5 287 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 ZNF511Q8NB15 262 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 SMG8Q8ND04 991 aaKnown RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 NAT14Q8WUY8 206 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 DNAJB3Q8WWF6 145 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 GAB3Q8WWW8 586 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PRPF31Q8WWY3 499 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms