RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 SPPL2BQ8TCT7 592 aa10.13□□□□□ -0.79
TTC1-201ENST00000231238 RNF139Q8WU17 664 aa10.13□□□□□ -0.79
TTC1-201ENST00000231238 RAPGEF5Q92565 580 aa10.13□□□□□ -0.79
TTC1-201ENST00000231238 BADQ92934 168 aa10.13□□□□□ -0.79
TTC1-201ENST00000231238 IGSF21Q96ID5 467 aa10.13□□□□□ -0.79
TTC1-201ENST00000231238 LBHD1Q9BQE6 289 aaPredicted RBP10.13□□□□□ -0.79
TTC1-201ENST00000231238 TRIM31Q9BZY9 425 aa10.13□□□□□ -0.79
TTC1-201ENST00000231238 DHX35Q9H5Z1 703 aaKnown RBP10.13□□□□□ -0.79
TTC1-201ENST00000231238 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.13□□□□□ -0.79
TTC1-201ENST00000231238 RRN3Q9NYV6 651 aa10.13□□□□□ -0.79
TTC1-201ENST00000231238 SPG21Q9NZD8 308 aa10.13□□□□□ -0.79
TTC1-201ENST00000231238 PCDHB12Q9Y5F1 795 aa10.13□□□□□ -0.79
TTC1-201ENST00000231238 KCNMB2Q9Y691 235 aa10.13□□□□□ -0.79
TTC1-201ENST00000231238 TCRBV7S2A1N4TA0A589 114 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 YJEFN3A6XGL0 299 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 E7ENQ6 273 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 F9P00740 461 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 H2AFXP16104 143 aaPredicted RBP10.12□□□□□ -0.79
TTC1-201ENST00000231238 IL1R2P27930 398 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 GBP1P32455 592 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 COILP38432 576 aaPredicted RBP10.12□□□□□ -0.79
TTC1-201ENST00000231238 ARL4AP40617 200 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 GLUD2P49448 558 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 RPL10AP62906 217 aaKnown RBP10.12□□□□□ -0.79
TTC1-201ENST00000231238 PDK2Q15119 407 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 TAF12Q16514 161 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 DDR2Q16832 855 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 ARL13BQ3SXY8 428 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 RAB41Q5JT25 222 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 RTP2Q5QGT7 225 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 ERMARDQ5T6L9 678 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 TRNP1Q6NT89 227 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 PRSS55Q6UWB4 352 aaPredicted RBP10.12□□□□□ -0.79
TTC1-201ENST00000231238 ZNF365Q70YC5 407 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 FAM131BQ86XD5 332 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 NUP93Q8N1F7 819 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 ARHGAP18Q8N392 663 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 FIBCD1Q8N539 461 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 ATAD1Q8NBU5 361 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 C2orf15Q8WU43 125 aaKnown RBP10.12□□□□□ -0.79
TTC1-201ENST00000231238 HDAC7Q8WUI4 952 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 TEKT4Q8WW24 435 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 EDEM1Q92611 657 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 HAUS1Q96CS2 278 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 PKMYT1Q99640 499 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 HTATIP2Q9BUP3 242 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 DPH5Q9H2P9 285 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 FBXO44Q9H4M3 255 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 CWH43Q9H720 699 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 GPATCH2LQ9NWQ4 482 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 DDIT4Q9NX09 232 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 ASIC3Q9UHC3 531 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 RAB21Q9UL25 225 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 AP4E1Q9UPM8 1137 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 NAALADL1Q9UQQ1 740 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 ZNF148Q9UQR1 794 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 CDY1Q9Y6F8 540 aa10.12□□□□□ -0.79
TTC1-201ENST00000231238 hCG_1818297A0A087WSY0 165 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 ESYT3A0FGR9 886 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 DAPK3O43293 454 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 CST8O60676 142 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 SASH3O75995 380 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 RTN3O95197 1032 aaPredicted RBP10.11□□□□□ -0.79
TTC1-201ENST00000231238 SOD2P04179 222 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 ELF1P32519 619 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 OR1D2P34982 312 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 CDKN2BP42772 138 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 MAGEA11P43364 429 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 HDAC4P56524 1084 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 YWHAGP61981 247 aaKnown RBP eCLIP10.11□□□□□ -0.79
TTC1-201ENST00000231238 GPR17Q13304 367 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 CUL1Q13616 776 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 MRPL58Q14197 206 aaKnown RBP10.11□□□□□ -0.79
TTC1-201ENST00000231238 SDHAF4Q5VUM1 108 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 BSPRYQ5W0U4 402 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 HFE2Q6ZVN8 426 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 TAS1R1Q7RTX1 841 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 TMEM173Q86WV6 379 aaPredicted RBP10.11□□□□□ -0.79
TTC1-201ENST00000231238 JAMLQ86YT9 394 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 ARFGAP1Q8N6T3 406 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 COLGALT1Q8NBJ5 622 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 ATL2Q8NHH9 583 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 SCAMP5Q8TAC9 235 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 BCL7CQ8WUZ0 217 aaPredicted RBP10.11□□□□□ -0.79
TTC1-201ENST00000231238 ATG4AQ8WYN0 398 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 C8orf48Q96LL4 319 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 SLC2A13Q96QE2 648 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 TRIM51Q9BSJ1 452 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 SNRNP25Q9BV90 132 aaKnown RBP10.11□□□□□ -0.79
TTC1-201ENST00000231238 DCLK3Q9C098 648 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 ACBD3Q9H3P7 528 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 IGFLR1Q9H665 355 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 C11orf16Q9NQ32 467 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 FAM114A2Q9NRY5 505 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 TMEM30AQ9NV96 361 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.11□□□□□ -0.796e-9■■■□□ 16
TTC1-201ENST00000231238 NR2E1Q9Y466 385 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 MRPL42Q9Y6G3 142 aaKnown RBP10.11□□□□□ -0.79
TTC1-201ENST00000231238 MICAL3Q7RTP6 2002 aa10.11□□□□□ -0.79
TTC1-201ENST00000231238 CEP350Q5VT06 3117 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms