RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 NT5C1B-RDH14C9J2C7 533 aa17.19■□□□□ 0.34
PTK7-202ENST00000230419 TM9SF1O15321 606 aa17.19■□□□□ 0.34
PTK7-202ENST00000230419 DCXO43602 365 aa17.19■□□□□ 0.34
PTK7-202ENST00000230419 CILPO75339 1184 aa17.19■□□□□ 0.34
PTK7-202ENST00000230419 SETSIPP0DME0 302 aa17.19■□□□□ 0.34
PTK7-202ENST00000230419 KLC1Q07866 573 aa17.19■□□□□ 0.34
PTK7-202ENST00000230419 ILDR2Q71H61 639 aa17.19■□□□□ 0.34
PTK7-202ENST00000230419 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.19■□□□□ 0.34
PTK7-202ENST00000230419 RHOBTB2Q9BYZ6 727 aa17.19■□□□□ 0.34
PTK7-202ENST00000230419 ACSS3Q9H6R3 686 aa17.19■□□□□ 0.34
PTK7-202ENST00000230419 TNRC6CQ9HCJ0 1690 aaKnown RBP17.19■□□□□ 0.34
PTK7-202ENST00000230419 A0A096LPK6 155 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 RNF103-CHMP3A0A140T963 221 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 UGT1A9O60656 530 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 TMEM63AO94886 807 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 PTPN1P18031 435 aaKnown RBP17.18■□□□□ 0.34
PTK7-202ENST00000230419 PTPN4P29074 926 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 NCALDP61601 193 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 MGAT5Q09328 741 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 FRA10AC1Q70Z53 315 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 FBXL18Q96ME1 805 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 EGFL8Q99944 293 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 TSPYL2Q9H2G4 693 aaPredicted RBP17.18■□□□□ 0.34
PTK7-202ENST00000230419 UGT1A7Q9HAW7 530 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 UGT1A10Q9HAW8 530 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 UGT1A8Q9HAW9 530 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 GNGT2O14610 69 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 TPP1O14773 563 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 KIF3CO14782 793 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 B4GALT4O60513 344 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 ASPAP45381 313 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 ALYREFQ86V81 257 aaKnown RBP17.18■□□□□ 0.34
PTK7-202ENST00000230419 ECHDC2Q86YB7 292 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 OXNAD1Q96HP4 312 aaPredicted RBP17.18■□□□□ 0.34
PTK7-202ENST00000230419 BEGAINQ9BUH8 593 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 TIAM2Q8IVF5 1701 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 NAV1Q8NEY1 1877 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 SMIM28A0A1B0GU29 152 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 PIRTP0C851 137 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 ECHS1P30084 290 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 BTKQ06187 659 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 KPNB1Q14974 876 aaKnown RBP17.18■□□□□ 0.34
PTK7-202ENST00000230419 SLC45A4Q5BKX6 768 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 B3GALNT2Q8NCR0 500 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 ADAM2Q99965 735 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 UPF3AQ9H1J1 476 aaKnown RBP17.18■□□□□ 0.34
PTK7-202ENST00000230419 UTP6Q9NYH9 597 aaKnown RBP17.18■□□□□ 0.34
PTK7-202ENST00000230419 USP54Q70EL1 1684 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 TSPAN1O60635 241 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 ODC1P11926 461 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 PDK4Q16654 411 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 TMTC4Q5T4D3 741 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 OVOS1Q6IE37 1185 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 TSHZ1Q6ZSZ6 1077 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.18■□□□□ 0.34
PTK7-202ENST00000230419 MARK4Q96L34 752 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 SLX4Q8IY92 1834 aa17.18■□□□□ 0.34
PTK7-202ENST00000230419 STRNO43815 780 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 TFE3P19532 575 aaPredicted RBP17.17■□□□□ 0.34
PTK7-202ENST00000230419 XPAP23025 273 aaPredicted RBP17.17■□□□□ 0.34
PTK7-202ENST00000230419 CD52P31358 61 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 FOXN2P32314 431 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 SPDYCQ5MJ68 293 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 PLD5Q8N7P1 536 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 ERLEC1Q96DZ1 483 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 FRMD8Q9BZ67 464 aaPredicted RBP17.17■□□□□ 0.34
PTK7-202ENST00000230419 FRMD8P1Q9BZ68 369 aaPredicted RBP17.17■□□□□ 0.34
PTK7-202ENST00000230419 SPATS2LQ9NUQ6 558 aaKnown RBP17.17■□□□□ 0.34
PTK7-202ENST00000230419 CDY2AQ9Y6F7 541 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 DNAL1Q4LDG9 190 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 SCUBE1Q8IWY4 988 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 CCDC185Q8N715 623 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 ZNF395Q9H8N7 513 aaPredicted RBP17.17■□□□□ 0.34
PTK7-202ENST00000230419 CAB39LQ9H9S4 337 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 KIAA0100Q14667 2235 aaKnown RBP17.17■□□□□ 0.34
PTK7-202ENST00000230419 ELNP15502 786 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 ERCC2P18074 760 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 TRIML2Q8N7C3 387 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 ILKAPQ9H0C8 392 aaPredicted RBP17.17■□□□□ 0.34
PTK7-202ENST00000230419 ZFYVE28Q9HCC9 887 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 SUN2Q9UH99 717 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 SFMBT1Q9UHJ3 866 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 MFHAS1Q9Y4C4 1052 aa17.17■□□□□ 0.34
PTK7-202ENST00000230419 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
PTK7-202ENST00000230419 H0YGN5 161 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 DNAJC6O75061 913 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 UNC5CO95185 931 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 TOP3BO95985 862 aaKnown RBP17.16■□□□□ 0.34
PTK7-202ENST00000230419 HADHAP40939 763 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 SLC1A6P48664 564 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 PDAP1Q13442 181 aaKnown RBP17.16■□□□□ 0.34
PTK7-202ENST00000230419 DEFB107AQ8IZN7 70 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 EFHD1Q9BUP0 239 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 OR12D3Q9UGF7 316 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 SIX4Q9UIU6 781 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 NFS1Q9Y697 457 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 PLCH1Q4KWH8 1693 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 C22orf31O95567 290 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 CHEK2O96017 543 aa17.16■□□□□ 0.34
PTK7-202ENST00000230419 LTFP02788 710 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms