RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 CRADDP78560 199 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 ARHGAP8P85298 464 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 AP1B1Q10567 949 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 DNAL1Q4LDG9 190 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 LRRC8BQ6P9F7 803 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 PACS1Q6VY07 963 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 SULF1Q8IWU6 871 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 SCUBE1Q8IWY4 988 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 HACE1Q8IYU2 909 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 PYROXD2Q8N2H3 581 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 ANKRD52Q8NB46 1076 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 SPDYE1Q8NFV5 336 aaPredicted RBP16.76■□□□□ 0.27
LTBR-201ENST00000228918 C18orf25Q96B23 403 aaPredicted RBP16.76■□□□□ 0.27
LTBR-201ENST00000228918 ZNF778Q96MU6 729 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 RILPQ96NA2 401 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 ENO4A6NNW6 628 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 TPP1O14773 563 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 MFSD11O43934 449 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 FGF3P11487 239 aaPredicted RBP16.76■□□□□ 0.27
LTBR-201ENST00000228918 RPL10AP62906 217 aaKnown RBP16.76■□□□□ 0.27
LTBR-201ENST00000228918 MARCH8Q5T0T0 291 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 N4BP2L1Q5TBK1 243 aaPredicted RBP16.76■□□□□ 0.27
LTBR-201ENST00000228918 IRGCQ6NXR0 463 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 C16orf46Q6P387 395 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 CASC4Q6P4E1 433 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 STRADAQ7RTN6 431 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 ULK2Q8IYT8 1036 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 ANKRD13AQ8IZ07 590 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 COLGALT1Q8NBJ5 622 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 BEST2Q8NFU1 509 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 PPP1R14CQ8TAE6 165 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 EMID1Q96A84 441 aaPredicted RBP16.76■□□□□ 0.27
LTBR-201ENST00000228918 LGMNQ99538 433 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 XPNPEP3Q9NQH7 507 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 EIF2B3Q9NR50 452 aaKnown RBP16.76■□□□□ 0.27
LTBR-201ENST00000228918 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.76■□□□□ 0.27
LTBR-201ENST00000228918 WASF2Q9Y6W5 498 aa16.76■□□□□ 0.27
LTBR-201ENST00000228918 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 DPPA5A6NC42 116 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 HOXA11P31270 313 aaPredicted RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 ARL4AP40617 200 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 PPIL2Q13356 520 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 TUBB3Q13509 450 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 PDE1CQ14123 709 aaPredicted RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 UBAP2LQ14157 1087 aaKnown RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 LBRQ14739 615 aaKnown RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 GRIK4Q16099 956 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 TRMT5Q32P41 509 aaKnown RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 GLRA4Q5JXX5 417 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 TEDDM1Q5T9Z0 273 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 MOB2Q70IA6 237 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 SHCBP1Q8NEM2 672 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 PIWIL2Q8TC59 973 aaKnown RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 KBTBD7Q8WVZ9 684 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 ARNTL2Q8WYA1 636 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 CDKL2Q92772 493 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 DCPSQ96C86 337 aaKnown RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 C1orf21Q9H246 121 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 ETAA1Q9NY74 926 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 RCOR3Q9P2K3 495 aaPredicted RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 GJD2Q9UKL4 321 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 SORCS3Q9UPU3 1222 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 H3BRB1 525 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 ITM2AO43736 263 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 PLIN3O60664 434 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 LYPLA1O75608 230 aaPredicted RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 FESP07332 822 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 SKIP12755 728 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 PGAM1P18669 254 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 AOC1P19801 751 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 MGAT1P26572 445 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 NAB1Q13506 487 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 ZRSR2Q15696 482 aaKnown RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 C9orf57Q5W0N0 161 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 RIPOR1Q6ZS17 1223 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 RFX8Q6ZV50 586 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 WDR75Q8IWA0 830 aaKnown RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 PANX3Q96QZ0 392 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 EIF2AQ9BY44 585 aaKnown RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 STN1Q9H668 368 aaKnown RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 TUT1Q9H6E5 874 aaKnown RBP16.75■□□□□ 0.27
LTBR-201ENST00000228918 VTA1Q9NP79 307 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 FZD10Q9ULW2 581 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 DNAJC16Q9Y2G8 782 aa16.75■□□□□ 0.27
LTBR-201ENST00000228918 RNF103O00237 685 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 AHCYL1O43865 530 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 CIB2O75838 187 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 SNUPNO95149 360 aaKnown RBP16.74■□□□□ 0.27
LTBR-201ENST00000228918 ACADSBP45954 432 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 TUBP50607 506 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 SESN2P58004 480 aaPredicted RBP16.74■□□□□ 0.27
LTBR-201ENST00000228918 PCLAFQ15004 111 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 SLC27A1Q6PCB7 646 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 FAM131BQ86XD5 332 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 CCNJLQ8IV13 435 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 CRYBG2Q8N1P7 616 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 PPFIBP2Q8ND30 876 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 CLPTM1LQ96KA5 538 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 THTPAQ9BU02 230 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 APOL6Q9BWW8 343 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms