RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 ZDHHC17Q8IUH5 632 aa18.27■□□□□ 0.51
EXTL3-201ENST00000220562 SCUBE3Q8IX30 993 aa18.27■□□□□ 0.51
EXTL3-201ENST00000220562 ADAM32Q8TC27 787 aa18.27■□□□□ 0.51
EXTL3-201ENST00000220562 OXNAD1Q96HP4 312 aaPredicted RBP18.27■□□□□ 0.51
EXTL3-201ENST00000220562 TUT1Q9H6E5 874 aaKnown RBP18.27■□□□□ 0.51
EXTL3-201ENST00000220562 IFRD1O00458 451 aaPredicted RBP18.27■□□□□ 0.51
EXTL3-201ENST00000220562 CNOT3O75175 753 aaKnown RBP18.27■□□□□ 0.51
EXTL3-201ENST00000220562 SERPINE1P05121 402 aa18.27■□□□□ 0.51
EXTL3-201ENST00000220562 FGFR1P11362 822 aa18.27■□□□□ 0.51
EXTL3-201ENST00000220562 SKIV2L2P42285 1042 aaKnown RBP18.27■□□□□ 0.51
EXTL3-201ENST00000220562 ZNF268Q14587 947 aaPredicted RBP18.27■□□□□ 0.51
EXTL3-201ENST00000220562 TRIM71Q2Q1W2 868 aaKnown RBP18.27■□□□□ 0.51
EXTL3-201ENST00000220562 TRMT11Q7Z4G4 463 aaKnown RBP18.27■□□□□ 0.51
EXTL3-201ENST00000220562 CYP2W1Q8TAV3 490 aa18.27■□□□□ 0.51
EXTL3-201ENST00000220562 MID1IP1Q9NPA3 183 aa18.27■□□□□ 0.51
EXTL3-201ENST00000220562 ANKRD6Q9Y2G4 727 aa18.27■□□□□ 0.51
EXTL3-201ENST00000220562 USP20Q9Y2K6 914 aa18.27■□□□□ 0.51
EXTL3-201ENST00000220562 PCDHA3Q9Y5H8 950 aa18.27■□□□□ 0.51
EXTL3-201ENST00000220562 CCDC154A6NI56 674 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 CLPTM1O96005 669 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 EPHX2P34913 555 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 ARMCX4Q5H9R4 360 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 TRPC4APQ8TEL6 797 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 SMARCD1Q96GM5 515 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 PNMA5Q96PV4 448 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 PARVBQ9HBI1 364 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 PLA2G4CQ9UP65 541 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 FAM98BQ52LJ0 330 aaKnown RBP18.26■□□□□ 0.51
EXTL3-201ENST00000220562 FNDC5Q8NAU1 212 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 GDPD5Q8WTR4 605 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 TPD52L3Q96J77 140 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 RNPEPQ9H4A4 650 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 SH3BP4Q9P0V3 963 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 TDRKHQ9Y2W6 561 aaKnown RBP18.26■□□□□ 0.51
EXTL3-201ENST00000220562 USP32Q8NFA0 1604 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 ZSCAN5CA6NGD5 496 aaPredicted RBP18.26■□□□□ 0.51
EXTL3-201ENST00000220562 TK2O00142 265 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 RAMP2O60895 175 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 CRABP2P29373 138 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 SHMT1P34896 483 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 FEN1P39748 380 aaKnown RBP18.26■□□□□ 0.51
EXTL3-201ENST00000220562 TMC3Q7Z5M5 1100 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 FBXO39Q8N4B4 442 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 POMKQ9H5K3 350 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 VTI1BQ9UEU0 232 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 FYNP06241 537 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 FAM153BP0C7A2 387 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 FASTKQ14296 549 aaKnown RBP18.26■□□□□ 0.51
EXTL3-201ENST00000220562 FAM153CQ494X1 144 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 GLT6D1Q7Z4J2 308 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 CYP4Z2PQ8N1L4 340 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 RSPH1Q8WYR4 309 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 PGLYRP2Q96PD5 576 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 BTBD10Q9BSF8 475 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 RAD51BO15315 384 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 IL1R1P14778 569 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 TGM3Q08188 693 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 HIC2Q96JB3 615 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 TMEM237Q96Q45 408 aa18.26■□□□□ 0.51
EXTL3-201ENST00000220562 PIK3C2BO00750 1634 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 SSTR1P30872 391 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 NPY2RP49146 381 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 PRKAA1Q13131 559 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 PLEKHA7Q6IQ23 1121 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 CERKQ8TCT0 537 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 UTP15Q8TED0 518 aaKnown RBP18.25■□□□□ 0.51
EXTL3-201ENST00000220562 CCDC3Q9BQI4 270 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 GAKO14976 1311 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 FAM25AB3EWG3 89 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 FAM25CB3EWG5 89 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 FAM25GB3EWG6 89 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 TMEM114B3SHH9 223 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 PEX1O43933 1283 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 RARAP10276 462 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 FASP25445 335 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 PPATQ06203 517 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 GRIK3Q13003 919 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 MAD2L1Q13257 205 aaPredicted RBP18.25■□□□□ 0.51
EXTL3-201ENST00000220562 APBA2Q99767 749 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 FUCA2Q9BTY2 467 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 FBXO44Q9H4M3 255 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 ZMYM5Q9UJ78 669 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 LMTK2Q8IWU2 1503 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 SERPINF2P08697 491 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 KRT20P35900 424 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 NR2C2P49116 596 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 RAB14P61106 215 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 SHROOM1Q2M3G4 852 aaPredicted RBP18.25■□□□□ 0.51
EXTL3-201ENST00000220562 PRMT9Q6P2P2 845 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 OTOP1Q7RTM1 612 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 CROTQ9UKG9 612 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 DUSP12Q9UNI6 340 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 E7ENQ6 273 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 EIF2S1P05198 315 aaKnown RBP18.25■□□□□ 0.51
EXTL3-201ENST00000220562 GP5P40197 560 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 GUCA1AP43080 201 aaPredicted RBP18.25■□□□□ 0.51
EXTL3-201ENST00000220562 MFSD10Q14728 455 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 C9orf131Q5VYM1 1079 aa18.25■□□□□ 0.51
EXTL3-201ENST00000220562 TYW3Q6IPR3 259 aaKnown RBP18.25■□□□□ 0.51
EXTL3-201ENST00000220562 NDUFA13Q9P0J0 144 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms