RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 ZSCAN5BA6NJL1 495 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 TMEM114B3SHH9 223 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 H3BMQ9 156 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 CST8O60676 142 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 CCNA2P20248 432 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 FSTL1Q12841 308 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 TAF5Q15542 800 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 UBE2UQ5VVX9 321 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 SCARA3Q6AZY7 606 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 PARP8Q8N3A8 854 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 COG8Q96MW5 612 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 CGREF1Q99674 301 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 BEGAINQ9BUH8 593 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 PCDHAC1Q9H158 963 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 WDR55Q9H6Y2 383 aaPredicted RBP15.05■□□□□ -0
PTPRA-201ENST00000216877 STK39Q9UEW8 545 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 AP4E1Q9UPM8 1137 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 SATB2Q9UPW6 733 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 SLC27A5Q9Y2P5 690 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 CTDP1Q9Y5B0 961 aaPredicted RBP15.05■□□□□ -0
PTPRA-201ENST00000216877 ZBTB7AO95365 584 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 PIM1P11309 404 aaPredicted RBP15.05■□□□□ -0
PTPRA-201ENST00000216877 ME2P23368 584 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 HSD17B4P51659 736 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 KLF10Q13118 480 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 ORC2Q13416 577 aaPredicted RBP15.05■□□□□ -0
PTPRA-201ENST00000216877 NDUFA5Q16718 116 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 MGAT5BQ3V5L5 792 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 PGM2L1Q6PCE3 622 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 RELL1Q8IUW5 271 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 CYP2W1Q8TAV3 490 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 ZFYVE19Q96K21 471 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 FAM84BQ96KN1 310 aaPredicted RBP15.05■□□□□ -0
PTPRA-201ENST00000216877 PCSK1NQ9UHG2 260 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 GNPTGQ9UJJ9 305 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 BAZ2AQ9UIF9 1905 aaKnown RBP15.05■□□□□ -0
PTPRA-201ENST00000216877 GOLGB1Q14789 3259 aaKnown RBP15.05■□□□□ -0
PTPRA-201ENST00000216877 SPATA31A1Q5TZJ5 1347 aa15.05■□□□□ -0
PTPRA-201ENST00000216877 H7C0C1 242 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 AGRPO00253 132 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 TMEM63AO94886 807 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 BPGMP07738 259 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 HOXA13P31271 388 aaPredicted RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 ATP5OP48047 213 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 IDH3AP50213 366 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 COPZ1P61923 177 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 PMS2P3Q13401 168 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 PLCL1Q15111 1095 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 MOGQ16653 247 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 USP37Q86T82 979 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 RFX6Q8HWS3 928 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 SLFN12Q8IYM2 578 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 DSELQ8IZU8 1212 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 DEPDC1BQ8WUY9 529 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 SLC29A1Q99808 456 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 EIF2AK1Q9BQI3 630 aaKnown RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 SMARCAD1Q9H4L7 1026 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 RPF2Q9H7B2 306 aaKnown RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 POLIQ9UNA4 740 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 ERGIC3Q9Y282 383 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 AFG3L2Q9Y4W6 797 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 ARHGEF35A5YM69 484 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 CXorf49A8MYA2 514 aaPredicted RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 EDIL3O43854 480 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 CD1EP15812 388 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 TAL1P17542 331 aaPredicted RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 GAP43P17677 238 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 TFE3P19532 575 aaPredicted RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 PRDX6P30041 224 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 RPL22P35268 128 aaKnown RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 GMPRP36959 345 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 EN1Q05925 392 aaPredicted RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 DARS2Q6PI48 645 aaKnown RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 RFPL4BQ6ZWI9 263 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 ADGRF4Q8IZF3 695 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 FIBCD1Q8N539 461 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 SERPINB13Q9UIV8 391 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 SLC8A2Q9UPR5 921 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 ZNF536O15090 1300 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 FAM149AA5PLN7 773 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 TIPRLO75663 272 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 DLGAP3O95886 979 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 P4HBP07237 508 aaKnown RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 GNAO1P09471 354 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 TCF7P36402 384 aaPredicted RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 RAB15P59190 212 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 RPL26P61254 145 aaKnown RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 LSM3P62310 102 aaKnown RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 PRKG1Q13976 671 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 N4BP2L1Q5TBK1 243 aaPredicted RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 RSBN1Q5VWQ0 802 aaPredicted RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 ZFP1Q6P2D0 407 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 C16orf89Q6UX73 402 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 ATG14Q6ZNE5 492 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 BTLAQ7Z6A9 289 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 PCGF5Q86SE9 256 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 ZC3H3Q8IXZ2 948 aaKnown RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 OSBPL11Q9BXB4 747 aa15.04■□□□□ -0
PTPRA-201ENST00000216877 TP63Q9H3D4 680 aaPredicted RBP15.04■□□□□ -0
PTPRA-201ENST00000216877 ATP8B3O60423 1300 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms