RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 GAREM1Q9H706 876 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 ABCB8Q9NUT2 735 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 FNDC3AQ9Y2H6 1198 aaKnown RBP20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 CER1O95813 267 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 LATS1O95835 1130 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 SETSIPP0DME0 302 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 VDRP11473 427 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 MATKP42679 507 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 DAOAP59103 153 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 PTPRNQ16849 979 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 FNDC3BQ53EP0 1204 aaKnown RBP20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 COBLL1Q53SF7 1204 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 ADGRF1Q5T601 910 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 CHST9Q7L1S5 443 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 GLRX5Q86SX6 157 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 ADIPOR2Q86V24 386 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 KCTD13Q8WZ19 329 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 SLC35C1Q96A29 364 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 PCED1AQ9H1Q7 454 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 LHX5Q9H2C1 402 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 CNGB3Q9NQW8 809 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 RMND1Q9NWS8 449 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 GGA2Q9UJY4 613 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 ATP6V1DQ9Y5K8 247 aa20.52■□□□□ 0.88
SYNGR1-201ENST00000216155 TRIM49BA6NDI0 452 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 TAF4O00268 1085 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 ZNF883P0CG24 379 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 PABPC1P11940 636 aaKnown RBP20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 ACSL1P33121 698 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 YWHAEP62258 255 aaKnown RBP20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 FKBP3Q00688 224 aaKnown RBP20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 LRMPQ12912 555 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 ZNF658Q5TYW1 1059 aaPredicted RBP20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 ANKRD40Q6AI12 368 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 MSANTD2Q6P1R3 559 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 KIAA0907Q7Z7F0 614 aaPredicted RBP20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 PROSER1Q86XN7 944 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 AHI1Q8N157 1196 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 SCML4Q8N228 414 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 WFDC5Q8TCV5 224 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 SNX19Q92543 992 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 TMA16Q96EY4 203 aaKnown RBP20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 CCDC34Q96HJ3 373 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 TSG101Q99816 390 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 C6orf106Q9H6K1 298 aaPredicted RBP20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 TM7SF3Q9NS93 570 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 ABCC13Q9NSE7 274 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 PLXNB3Q9ULL4 1909 aa20.51■□□□□ 0.87
SYNGR1-201ENST00000216155 A0A1B0GVT2 93 aa20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 GABBR2O75899 941 aa20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 IGLV3-27P01718 113 aa20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 LCP1P13796 627 aa20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 HOXB3P14651 431 aaPredicted RBP20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 TBXAS1P24557 533 aaPredicted RBP20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 RING1Q06587 406 aa20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 SCAPQ12770 1279 aa20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 HLA-BQ31612 363 aa20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 IL27RAQ6UWB1 636 aa20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 FMR1NBQ8N0W7 255 aaPredicted RBP20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 BAHD1Q8TBE0 780 aaPredicted RBP20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 SETD7Q8WTS6 366 aaKnown RBP20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 TFAP2BQ92481 460 aa20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 PLA2G4CQ9UP65 541 aa20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 DSPP15924 2871 aaKnown RBP20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 TMEM131Q92545 1883 aa20.5■□□□□ 0.87
SYNGR1-201ENST00000216155 RGS7P49802 495 aa20.49■□□□□ 0.87
SYNGR1-201ENST00000216155 FAM133BQ5BKY9 247 aaKnown RBP20.49■□□□□ 0.87
SYNGR1-201ENST00000216155 MBLAC2Q68D91 279 aa20.49■□□□□ 0.87
SYNGR1-201ENST00000216155 RFWD3Q6PCD5 774 aa20.49■□□□□ 0.87
SYNGR1-201ENST00000216155 LCLAT1Q6UWP7 414 aa20.49■□□□□ 0.87
SYNGR1-201ENST00000216155 SLCO6A1Q86UG4 719 aa20.49■□□□□ 0.87
SYNGR1-201ENST00000216155 SLC35F5Q8WV83 523 aa20.49■□□□□ 0.87
SYNGR1-201ENST00000216155 PRSS16Q9NQE7 514 aa20.49■□□□□ 0.87
SYNGR1-201ENST00000216155 ARMCX3Q9UH62 379 aaPredicted RBP20.49■□□□□ 0.87
SYNGR1-201ENST00000216155 APOBEC2Q9Y235 224 aaKnown RBP20.49■□□□□ 0.87
SYNGR1-201ENST00000216155 PTPRBP23467 1997 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 ANKRD11Q6UB99 2663 aaPredicted RBP20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 PIK3R2O00459 728 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 PAEPP09466 180 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 DLDP09622 509 aaKnown RBP20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 SLC6A4P31645 630 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 CD70P32970 193 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 CSNK1EP49674 416 aaKnown RBP20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 AFF3P51826 1226 aaKnown RBP20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 RPS14P62263 151 aaKnown RBP20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 LRRC63Q05C16 580 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 PMF1Q6P1K2 205 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 TMEM270Q6UE05 265 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 CCNI2Q6ZMN8 369 aaPredicted RBP20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 CLEC4CQ8WTT0 213 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 ERCC4Q92889 916 aaPredicted RBP20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 PRICKLE1Q96MT3 831 aaPredicted RBP20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 GSDMAQ96QA5 445 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 ZSWIM1Q9BR11 485 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 FBRSQ9HAH7 460 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 TOR4AQ9NXH8 423 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 KIAA1257Q9ULG3 409 aa20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.48■□□□□ 0.87
SYNGR1-201ENST00000216155 LHX6Q9UPM6 363 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms