RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 NFICP08651 508 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 ITGAXP20702 1163 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 ARRB2P32121 409 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 TFDP2Q14188 446 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 VSIG10LQ86VR7 867 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 SESTD1Q86VW0 696 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 FAM131BQ86XD5 332 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 RNF135Q8IUD6 432 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 NTPCRQ9BSD7 190 aaKnown RBP17.23■□□□□ 0.35
CTDP1-201ENST00000075430 UBAP1Q9NZ09 502 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 SDR42E2A6NKP2 422 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 LDHAP00338 332 aaKnown RBP17.22■□□□□ 0.35
CTDP1-201ENST00000075430 PRKCBP05771 671 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 PDGFRBP09619 1106 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 XRCC1P18887 633 aaPredicted RBP17.22■□□□□ 0.35
CTDP1-201ENST00000075430 GPD1P21695 349 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 PCSK6P29122 969 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 CLCN3P51790 818 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 CDH15P55291 814 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 SNRPFP62306 86 aaKnown RBP17.22■□□□□ 0.35
CTDP1-201ENST00000075430 ART3Q13508 389 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 LRRC38Q5VT99 294 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 DCAF15Q66K64 600 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 HEATR6Q6AI08 1181 aaKnown RBP17.22■□□□□ 0.35
CTDP1-201ENST00000075430 TMC7Q7Z402 723 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 PLD6Q8N2A8 252 aaKnown RBP17.22■□□□□ 0.35
CTDP1-201ENST00000075430 BHLHE22Q8NFJ8 381 aaPredicted RBP17.22■□□□□ 0.35
CTDP1-201ENST00000075430 MAPK15Q8TD08 544 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 C7orf26Q96N11 449 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 IL1RL2Q9HB29 575 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 XPNPEP3Q9NQH7 507 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 RPS6KL1Q9Y6S9 549 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 CROCCQ5TZA2 2017 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 PMM2O15305 246 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 NME5P56597 212 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 TMEM132BQ14DG7 1078 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 KLHDC10Q6PID8 442 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 TRIM67Q6ZTA4 783 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 ACOT1Q86TX2 421 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 PCDH19Q8TAB3 1148 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 RNF157Q96PX1 679 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 SDCBP2Q9H190 292 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 PPCSQ9HAB8 311 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 DOLKQ9UPQ8 538 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 CITO14578 2027 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 TFPTP0C1Z6 253 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 COX4I1P13073 169 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 CPOXP36551 454 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 IRF9Q00978 393 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 PTPN11Q06124 597 aaPredicted RBP17.22■□□□□ 0.35
CTDP1-201ENST00000075430 KCNJ11Q14654 390 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 NOMO1Q15155 1222 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 ANKRD20A4Q4UJ75 823 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 FAM183BPQ6ZVS7 135 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 PQLC3Q8N755 202 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 CLEC4CQ8WTT0 213 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 EME1Q96AY2 570 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 TMIGD2Q96BF3 282 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 RCN3Q96D15 328 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 DNAAF2Q9NVR5 837 aaKnown RBP17.22■□□□□ 0.35
CTDP1-201ENST00000075430 ATXN10Q9UBB4 475 aa17.22■□□□□ 0.35
CTDP1-201ENST00000075430 LYPLA2O95372 231 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 ADORA2BP29275 332 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 FDFT1P37268 417 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 RABGGTBP53611 331 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 TP53INP2Q8IXH6 220 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 CPB2Q96IY4 423 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 NPAS2Q99743 824 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 OMDQ99983 421 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 SNRNP25Q9BV90 132 aaKnown RBP17.21■□□□□ 0.35
CTDP1-201ENST00000075430 TRPV6Q9H1D0 765 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 ACAD9Q9H845 621 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 AS3MTQ9HBK9 375 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 E7ESA3 106 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 PHGDHO43175 533 aaKnown RBP17.21■□□□□ 0.35
CTDP1-201ENST00000075430 PGK2P07205 417 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 KCNA2P16389 499 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 MPSTP25325 297 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 SDC4P31431 198 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 THOP1P52888 689 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 TRNP1Q6NT89 227 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 MAVSQ7Z434 540 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 TEX13BQ9BXU2 312 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 ELOVL4Q9GZR5 314 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 GGA3Q9NZ52 723 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 ARHGAP26Q9UNA1 814 aa17.21■□□□□ 0.35
CTDP1-201ENST00000075430 GNEQ9Y223 722 aaKnown RBP17.21■□□□□ 0.35
CTDP1-201ENST00000075430 PAPSS1O43252 624 aaPredicted RBP17.21■□□□□ 0.34
CTDP1-201ENST00000075430 OATP04181 439 aa17.21■□□□□ 0.34
CTDP1-201ENST00000075430 HDCP19113 662 aa17.21■□□□□ 0.34
CTDP1-201ENST00000075430 EIF4BP23588 611 aaKnown RBP17.21■□□□□ 0.34
CTDP1-201ENST00000075430 RPS27LQ71UM5 84 aaKnown RBP17.21■□□□□ 0.34
CTDP1-201ENST00000075430 ZFP28Q8NHY6 868 aa17.21■□□□□ 0.34
CTDP1-201ENST00000075430 ZNF669Q96BR6 464 aaPredicted RBP17.21■□□□□ 0.34
CTDP1-201ENST00000075430 CMTM5Q96DZ9 223 aa17.21■□□□□ 0.34
CTDP1-201ENST00000075430 SSU72Q9NP77 194 aaKnown RBP17.21■□□□□ 0.34
CTDP1-201ENST00000075430 SIRPGQ9P1W8 387 aa17.21■□□□□ 0.34
CTDP1-201ENST00000075430 COMMD3-BMI1R4GMX3 469 aa17.21■□□□□ 0.34
CTDP1-201ENST00000075430 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.34
CTDP1-201ENST00000075430 KLHL2O95198 593 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms