RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 DCTN3O75935 186 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 UBOX5O94941 541 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 ALDH1A1P00352 501 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 POMCP01189 267 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 ADRA1BP35368 520 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 SERPINB9P50453 376 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 AFF1P51825 1210 aaKnown RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 NKX3-2P78367 333 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 PRKCZQ05513 592 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 CCDC15Q0P6D6 951 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 IFRD2Q12894 506 aaPredicted RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 PAN2Q504Q3 1202 aaKnown RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 TIGD5Q53EQ6 642 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 INTS6LQ5JSJ4 861 aaKnown RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 CGB2Q6NT52 195 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 ZNF534Q76KX8 674 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 GPRIN1Q7Z2K8 1008 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 CCNJLQ8IV13 435 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 THEM5Q8N1Q8 247 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 AGGF1Q8N302 714 aaeCLIP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 ADAM32Q8TC27 787 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 PGAP3Q96FM1 320 aaPredicted RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 KCNK16Q96T55 309 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 ACBD6Q9BR61 282 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 VPS11Q9H270 941 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 PRDM12Q9H4Q4 367 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.52□□□□□ -1.051e-10■■□□□ 13.9
VAMP3-201ENST00000054666 KLHL8Q9P2G9 620 aaPredicted RBP8.52□□□□□ -1.05
VAMP3-201ENST00000054666 PRKAG3Q9UGI9 489 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 GRID1Q9ULK0 1009 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 TSC2P49815 1807 aa8.52□□□□□ -1.05
VAMP3-201ENST00000054666 PCNTO95613 3336 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 TDRD15B5MCY1 1934 aaKnown RBP8.51□□□□□ -1.05
VAMP3-201ENST00000054666 A0A0U1RQF3 1178 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 F5H423 210 aaPredicted RBP8.51□□□□□ -1.05
VAMP3-201ENST00000054666 DCLK1O15075 740 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 MTSS1O43312 755 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 CYP11A1P05108 521 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 PYGBP11216 843 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 MX2P20592 715 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 CACNB2Q08289 660 aaPredicted RBP8.51□□□□□ -1.05
VAMP3-201ENST00000054666 TUSC3Q13454 348 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 KCNA10Q16322 511 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 PARP6Q2NL67 630 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 FAM182AQ5T1J6 154 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 PRPF39Q86UA1 669 aaKnown RBP8.51□□□□□ -1.05
VAMP3-201ENST00000054666 ZMIZ2Q8NF64 920 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 SPOCK2Q92563 424 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 ZNF75CPQ92670 426 aaPredicted RBP8.51□□□□□ -1.05
VAMP3-201ENST00000054666 RNF34Q969K3 372 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 SIGLEC10Q96LC7 697 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 RMDN2Q96LZ7 410 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 ADAM2Q99965 735 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 PAAF1Q9BRP4 392 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 NAT9Q9BTE0 207 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 BRD8Q9H0E9 1235 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 SLCO1B3Q9NPD5 702 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 TMPRSS4Q9NRS4 437 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 GGT7Q9UJ14 662 aa8.51□□□□□ -1.05
VAMP3-201ENST00000054666 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.5□□□□□ -1.05
VAMP3-201ENST00000054666 WDR91A4D1P6 747 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 SDR42E2A6NKP2 422 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 FAM159BA6NKW6 160 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 I3L4J1 428 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 MGEA5O60502 916 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 PRKAR2AP13861 404 aaKnown RBP8.5□□□□□ -1.05
VAMP3-201ENST00000054666 ERCC2P18074 760 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 PGAM1P18669 254 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 IGFBP6P24592 240 aaPredicted RBP8.5□□□□□ -1.05
VAMP3-201ENST00000054666 CNTFP26441 200 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 PSMB4P28070 264 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 CST5P28325 142 aaPredicted RBP8.5□□□□□ -1.05
VAMP3-201ENST00000054666 TM4SF4P48230 202 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 NEK3P51956 506 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 RABGGTBP53611 331 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 CACNA2D1P54289 1103 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 SLC18A2Q05940 514 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 LPIN1Q14693 890 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 BSPRYQ5W0U4 402 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 OVOS1Q6IE37 1185 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 LRRC8BQ6P9F7 803 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 CHSY1Q86X52 802 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 TRIM42Q8IWZ5 723 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 PDCD7Q8N8D1 485 aaKnown RBP8.5□□□□□ -1.05
VAMP3-201ENST00000054666 HASPINQ8TF76 798 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 TTC17Q96AE7 1141 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 SERAC1Q96JX3 654 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 FAM111AQ96PZ2 611 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 COLEC11Q9BWP8 271 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 WDCPQ9H6R7 721 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 MANSC1Q9H8J5 431 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 ECT2Q9H8V3 914 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 CSNK1G1Q9HCP0 422 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 WDR6Q9NNW5 1121 aaKnown RBP8.5□□□□□ -1.05
VAMP3-201ENST00000054666 KLC4Q9NSK0 619 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 TXLNGQ9NUQ3 528 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 IGSF9Q9P2J2 1179 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 SLC17A7Q9P2U7 560 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 FBXW11Q9UKB1 542 aa8.5□□□□□ -1.05
VAMP3-201ENST00000054666 HHLA1C9JL84 531 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms