RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 LPIN1Q14693 890 aa26.89■■□□□ 1.9
RTN4R-201ENST00000043402 CCSAPQ6IQ19 270 aaPredicted RBP26.89■■□□□ 1.9
RTN4R-201ENST00000043402 ECHDC2Q86YB7 292 aa26.89■■□□□ 1.9
RTN4R-201ENST00000043402 MYLPFQ96A32 169 aa26.89■■□□□ 1.9
RTN4R-201ENST00000043402 SMARCD1Q96GM5 515 aa26.89■■□□□ 1.9
RTN4R-201ENST00000043402 UGT1A7Q9HAW7 530 aa26.89■■□□□ 1.9
RTN4R-201ENST00000043402 UGT1A10Q9HAW8 530 aa26.89■■□□□ 1.9
RTN4R-201ENST00000043402 UGT1A8Q9HAW9 530 aa26.89■■□□□ 1.9
RTN4R-201ENST00000043402 HAUS2Q9NVX0 235 aa26.89■■□□□ 1.9
RTN4R-201ENST00000043402 SF3B1O75533 1304 aaKnown RBP eCLIP26.88■■□□□ 1.893e-6■■■■■ 137.9
RTN4R-201ENST00000043402 A0A0U1RQF3 1178 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 RNF103O00237 685 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 LTFP02788 710 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 GLUD2P49448 558 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 SLC18A2Q05940 514 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 SEMA3BQ13214 749 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 KLHDC9Q8NEP7 349 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 HASPINQ8TF76 798 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 NTAN1Q96AB6 310 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 CSNK1G1Q9HCP0 422 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 KLHL14Q9P2G3 628 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 TDRD15B5MCY1 1934 aaKnown RBP26.88■■□□□ 1.89
RTN4R-201ENST00000043402 WDR91A4D1P6 747 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 PYGBP11216 843 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 PCSK1P29120 753 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 RNF43Q68DV7 783 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 ANKLE1Q8NAG6 615 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 XAB2Q9HCS7 855 aaKnown RBP26.88■■□□□ 1.89
RTN4R-201ENST00000043402 FBXW11Q9UKB1 542 aa26.88■■□□□ 1.89
RTN4R-201ENST00000043402 LPXNO60711 386 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 NEK3P51956 506 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 WASHC5Q12768 1159 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 SCAPQ12770 1279 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 CCNYQ8ND76 341 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 EDEM1Q92611 657 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 ADAM2Q99965 735 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 PLCD4Q9BRC7 762 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 TMLHEQ9NVH6 421 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 ZNF180Q9UJW8 692 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 TRIM49D1C9J1S8 452 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 CSH1P0DML2 217 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 CSH2P0DML3 217 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 ODC1P11926 461 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 HNRNPH1P31943 449 aaKnown RBP26.87■■□□□ 1.89
RTN4R-201ENST00000043402 FDFT1P37268 417 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 PDK1Q15118 436 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 TTC39BQ5VTQ0 682 aaPredicted RBP26.87■■□□□ 1.89
RTN4R-201ENST00000043402 FAM171BQ6P995 826 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 PDCD7Q8N8D1 485 aaKnown RBP26.87■■□□□ 1.89
RTN4R-201ENST00000043402 GSDMBQ8TAX9 411 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 PGAP3Q96FM1 320 aaPredicted RBP26.87■■□□□ 1.89
RTN4R-201ENST00000043402 DDIT4Q9NX09 232 aa26.87■■□□□ 1.89
RTN4R-201ENST00000043402 GSTA2P09210 222 aa26.86■■□□□ 1.89
RTN4R-201ENST00000043402 ERCC2P18074 760 aa26.86■■□□□ 1.89
RTN4R-201ENST00000043402 ETV4P43268 484 aa26.86■■□□□ 1.89
RTN4R-201ENST00000043402 APOPT1Q96IL0 206 aa26.86■■□□□ 1.89
RTN4R-201ENST00000043402 RXFP1Q9HBX9 757 aa26.86■■□□□ 1.89
RTN4R-201ENST00000043402 TRMT13Q9NUP7 481 aaKnown RBP26.86■■□□□ 1.89
RTN4R-201ENST00000043402 SEPT10Q9P0V9 454 aa26.86■■□□□ 1.89
RTN4R-201ENST00000043402 OPHN1O60890 802 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 RPLP2P05387 115 aaKnown RBP26.85■■□□□ 1.89
RTN4R-201ENST00000043402 BDNFP23560 247 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 RAB27AP51159 221 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 AIF1P55008 147 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 SEPT7Q16181 437 aaKnown RBP26.85■■□□□ 1.89
RTN4R-201ENST00000043402 OTOAQ7RTW8 1153 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 TMEM209Q96SK2 561 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 ACBD6Q9BR61 282 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 INPP5FQ9Y2H2 1132 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 PCDHA11Q9Y5I1 949 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 HGSO14964 777 aaPredicted RBP26.85■■□□□ 1.89
RTN4R-201ENST00000043402 CYP11A1P05108 521 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 LRRTM3Q86VH5 581 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 ZNF567Q8N184 647 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 PKMYT1Q99640 499 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 COLEC11Q9BWP8 271 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 VPS11Q9H270 941 aa26.85■■□□□ 1.89
RTN4R-201ENST00000043402 PIH1D1Q9NWS0 290 aaKnown RBP26.85■■□□□ 1.89
RTN4R-201ENST00000043402 FAM159BA6NKW6 160 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 F8W810 466 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 ITGB1P05556 798 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 DHRS4L1P0CG22 281 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 ELNP15502 786 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 PSMB4P28070 264 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 CRADDP78560 199 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 BNIP1Q12981 228 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 INTS6LQ5JSJ4 861 aaKnown RBP26.84■■□□□ 1.89
RTN4R-201ENST00000043402 OR10T2Q8NGX3 314 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 PTPRN2Q92932 1015 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 OXNAD1Q96HP4 312 aaPredicted RBP26.84■■□□□ 1.89
RTN4R-201ENST00000043402 ALG13Q9NP73 1137 aaKnown RBP26.84■■□□□ 1.89
RTN4R-201ENST00000043402 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.84■■□□□ 1.89
RTN4R-201ENST00000043402 PPP1R12AO14974 1030 aaPredicted RBP26.84■■□□□ 1.89
RTN4R-201ENST00000043402 SNRPAP09012 282 aaKnown RBP26.84■■□□□ 1.89
RTN4R-201ENST00000043402 ALADP13716 330 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 CDK16Q00536 496 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 CDHR3Q6ZTQ4 885 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 MOCS1Q9NZB8 636 aa26.84■■□□□ 1.89
RTN4R-201ENST00000043402 WDR27A2RRH5 827 aa26.83■■□□□ 1.89
RTN4R-201ENST00000043402 TMEM88BA6NKF7 163 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms