RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 AZIN2Q96A70 460 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 NMD3Q96D46 503 aaKnown RBP10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 GCNAQ96QF7 691 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 BCO2Q9BYV7 579 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 MIS12Q9H081 205 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 RNPEPQ9H4A4 650 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 DHX35Q9H5Z1 703 aaKnown RBP10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 XPNPEP3Q9NQH7 507 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 ZNF358Q9NW07 568 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 SORCS3Q9UPU3 1222 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 PHF24Q9UPV7 400 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 POMPQ9Y244 141 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 LACTBL1A8MY62 500 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 B4GALT4O60513 344 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 PLIN3O60664 434 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 OR6B1O95007 311 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 GSRP00390 522 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 ALDOAP04075 364 aaKnown RBP10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 CYP2F1P24903 491 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 SDC4P31431 198 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 GRIA2P42262 883 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 CDK18Q07002 472 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 TBL3Q12788 808 aaKnown RBP10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 IER5Q5VY09 327 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 JADE1Q6IE81 842 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 CES3Q6UWW8 571 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 ATG14Q6ZNE5 492 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 SAMD7Q7Z3H4 446 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 CDKL3Q8IVW4 592 aaPredicted RBP10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 PHTF2Q8N3S3 785 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 ZNF280CQ8ND82 737 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 MCUQ8NE86 351 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 AGBL3Q8NEM8 1001 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 SLX1AQ9BQ83 275 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 CLIC5Q9NZA1 410 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 SPATA7Q9P0W8 599 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 CCDC160A6NGH7 325 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 E9PBE3 544 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 CCNT2O60583 730 aaKnown RBP10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 KLHL41O60662 606 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 GLRA3O75311 464 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 FARP2O94887 1054 aaPredicted RBP10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 SERPINE1P05121 402 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 ATP5BP06576 529 aaKnown RBP10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 F7P08709 466 aaPredicted RBP10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 VDRP11473 427 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 CYP3A5P20815 502 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 NDST1P52848 882 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 ATXN1P54253 815 aaKnown RBP10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 PDK3Q15120 406 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 KCNT2Q6UVM3 1135 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 DLK2Q6UY11 383 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 FRMD7Q6ZUT3 714 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 SCUBE3Q8IX30 993 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 NME8Q8N427 588 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 MTMR14Q8NCE2 650 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 RTP4Q96DX8 246 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 PPP1R36Q96LQ0 422 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 CEP41Q9BYV8 373 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 NRDE2Q9H7Z3 1164 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 ATXN10Q9UBB4 475 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 ZNF510Q9Y2H8 683 aa10.82□□□□□ -0.68
CX3CL1-201ENST00000006053 ITGAXP20702 1163 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 SLC10A2Q12908 348 aaPredicted RBP10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 HNRNPDQ14103 355 aaKnown RBP10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 PCLAFQ15004 111 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 LY6KQ17RY6 165 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 PACS1Q6VY07 963 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 ADGRG6Q86SQ4 1221 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 LCA5Q86VQ0 697 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 ICA1LQ8NDH6 482 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 CDKL2Q92772 493 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 KCNN1Q92952 543 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 ABTB1Q969K4 478 aaPredicted RBP10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 CMTM5Q96DZ9 223 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 WRNIP1Q96S55 665 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 CDT1Q9H211 546 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 TMEM216Q9P0N5 145 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 PIM2Q9P1W9 311 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 TXNDC16Q9P2K2 825 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 ITGA11Q9UKX5 1188 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 PSAT1Q9Y617 370 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 MYO18AQ92614 2054 aaKnown RBP10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 CAPN8A6NHC0 703 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 SUPT3HO75486 399 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 SPATA31D3P0C874 917 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 TFE3P19532 575 aaPredicted RBP10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 TYK2P29597 1187 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 ARRB2P32121 409 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 TNFAIP1Q13829 316 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 HEATR6Q6AI08 1181 aaKnown RBP10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 SPATA31D4Q6ZUB0 917 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 RTKN2Q8IZC4 609 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 NAT14Q8WUY8 206 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 TFB1MQ8WVM0 346 aaKnown RBP10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 PGBD4Q96DM1 585 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 INPP5FQ9Y2H2 1132 aa10.81□□□□□ -0.68
CX3CL1-201ENST00000006053 BRWD3Q6RI45 1802 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms