RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Rbm22Q8BHS3 420 aaKnown RBP13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ccdc28bQ8CEG5 200 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Znf426Q8R1D1 550 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Sytl2Q99N50 950 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 CoprsQ9CQ13 173 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ripk3Q9QZL0 486 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Mapk13Q9Z1B7 366 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Scn11aQ9R053 1765 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Cntnap4Q99P47 1310 aa13.6□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Gm12394A2AKP6 982 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Pik3r2O08908 722 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 ChrngP04760 519 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 ZfaP23607 742 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ccr5P51682 354 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Psmb4P99026 264 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Pdss1Q33DR2 409 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Nt5dc3Q3UHB1 546 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Gpd1lQ3ULJ0 351 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Rcsd1Q3UZA1 412 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Arhgap1Q5FWK3 439 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ptpn14Q62130 1189 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Atp4aQ64436 1033 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 ChfrQ810L3 664 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Bmp3Q8BHE5 468 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 FsbpQ8BKE5 299 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Zfp398Q8BV16 643 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Tmem154Q8C4Q9 181 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 CntrobQ8CB62 887 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Npm3Q9CPP0 175 aaKnown RBP13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Rwdd4Q9CPR1 188 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Trpc7Q9WVC5 862 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 M1apQ9Z0E1 529 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Rtl9Q32KG4 1339 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Scn3aA2ASI5 1947 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ecm29Q6PDI5 1840 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Gm379J3QQ19 296 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 GzmgP13366 248 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Sash1P59808 1230 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Tmem65Q4VAE3 234 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Cyb5d1Q5NCY3 228 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 RetsatQ64FW2 609 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 WlsQ6DID7 541 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 March4Q80TE3 409 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Frmd4aQ8BIE6 1020 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Enpp4Q8BTJ4 456 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Tlk1Q8C0V0 766 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 BfarQ8R079 450 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ca9Q8VHB5 437 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Snx29Q9D3S3 818 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Tlr6Q9EPW9 795 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Copg2Q9QXK3 871 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ap4b1Q9WV76 738 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Arhgef10Q8C033 1345 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 B020011L13RikA0A087WQI7 412 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Tp53P02340 387 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Krt6aP50446 553 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Pfkfb2P70265 519 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Zbtb14Q08376 449 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Gm4981Q3ULJ8 291 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Cypt2Q6P924 180 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ano4Q8C5H1 955 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 H2-Q4Q8HWB2 354 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Atp6v1b1Q91YH6 513 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ptdss1Q99LH2 473 aaKnown RBP13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Hic1Q9R1Y5 733 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Tbk1Q9WUN2 729 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ildr2B5TVM2 661 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Unc5cO08747 931 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Mcpt4P21812 246 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Znf821Q6PD05 413 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Fam107aQ78TU8 144 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Wdr91Q7TMQ7 748 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Tmem169Q8BG50 297 aa13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Ino80bQ99PT3 375 aaKnown RBP13.59□□□□□ -0.23
Pdgfra-205ENSMUST00000201711 Lhx5P61375 402 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 YwhahP68510 246 aaKnown RBP13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Grb7Q03160 535 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Pik3r6Q3U6Q4 756 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Slc16a10Q3U9N9 512 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Olfr698Q7TRN4 311 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Rhbdf2Q80WQ6 827 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Gabra5Q8BHJ7 463 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Ppme1Q8BVQ5 386 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Q9CQC3 228 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Mrpl57Q9CQF8 102 aaKnown RBP13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Znhit2Q9QY66 399 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Wnt8bQ9WUD6 350 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 NinQ61043 2035 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Rhox3cA2AWM0 215 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Kpna7C0LLJ0 499 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Kifc5bE9PUA5 672 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Rhox3hL7MU37 215 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Calb2Q08331 271 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Rhox3aQ4TU90 215 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Rgl2Q61193 778 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 B3galnt2Q8BG28 504 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Nipal4Q8BZF2 406 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Slc35f5Q8R314 524 aa13.58□□□□□ -0.24
Pdgfra-205ENSMUST00000201711 Hdac11Q91WA3 347 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms