RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Q8BHN7 327 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Exoc3l1Q8BI71 739 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ldhal6bQ8BVP2 382 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 NcaphQ8C156 731 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ccdc186Q8C9S4 917 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Itgbl1Q8VDV0 494 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Usp11Q99K46 921 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Fuca1Q99LJ1 452 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Commd8Q9CZG3 183 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Doc2gQ9ESN1 387 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ccdc86Q9JJ89 426 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 AuhQ9JLZ3 314 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Neu2Q9JMH3 379 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Scgb2b21A0A087WQA9 112 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gm13941A2AJ38 245 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Smok3aC0HKC8 504 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Smok3bC0HKC9 504 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 AgxtO35423 414 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Hnrnph1O35737 449 aaKnown RBP13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Il3P01586 166 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 CcnoP0C242 352 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Pde6bP23440 856 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ppm1aP49443 382 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 MipP51180 263 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Fubp3Q3TIX6 575 aaKnown RBP13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Sema3cQ62181 751 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 DbhQ64237 622 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ino80dQ66JY2 873 aaKnown RBP13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Fastkd5Q7TMV3 762 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Iars2Q8BIJ6 1012 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Msantd1Q8BIL2 278 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Castor2Q8CAB8 329 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Fam151aQ8QZW3 608 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Tmprss4Q8VCA5 435 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Mrps18aQ99N85 196 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Alg13Q9D8C3 1166 aaKnown RBP13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Pgam1Q9DBJ1 254 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 PllpQ9DCU2 182 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Acox2Q9QXD1 681 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Plod1Q9R0E2 728 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gm5538W4VSP6 401 aa13.73□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Sh3pxd2bA2AAY5 908 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 March10E9PX79 788 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Olfr611K7N609 323 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Olfr612L7N462 323 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ercc2O08811 760 aaKnown RBP13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Hcn2O88703 863 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Cd72P21855 354 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Crabp2P22935 138 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Vps4bP46467 444 aaKnown RBP13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 B3gat3P58158 335 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Smpd1Q04519 627 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Hsdl2Q2TPA8 490 aaKnown RBP13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Krt26Q3TRJ4 462 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gcnt3Q5JCT0 437 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gpr65Q61038 337 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Nomo1Q6GQT9 1214 aaKnown RBP13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Adam39Q7M762 756 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Abcg2Q7TMS5 657 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Olfr533Q7TRT7 320 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ccdc40Q8BI79 1192 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Tmem220Q8BP07 167 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Serpina3bQ8BYY9 420 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 NaprtQ8CC86 538 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 PygbQ8CI94 843 aaKnown RBP13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Prrg2Q8R182 198 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Kcnc4Q8R1C0 628 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Dnajc28Q8VCE1 385 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Olfr532Q8VGT4 309 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ankrd54Q91WK7 299 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Akr1c14Q91WT7 323 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Nt5c3aQ9D020 331 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Sun1Q9D666 913 aaKnown RBP13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Serpina1fQ9DCQ7 411 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Erap1Q9EQH2 930 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ropn1Q9ESG2 212 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Timp4Q9JHB3 224 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Stap1Q9JM90 297 aaKnown RBP13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Pex11bQ9Z210 259 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Crlf3Q9Z2L7 442 aa13.72□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Proca1B0QZF7 307 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gm12800B1AUV4 484 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gm3002E9PW72 216 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gm4788E9Q8B5 879 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gm12794L7MTS5 483 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Gm3739L7N296 216 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 ShdO88834 343 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 SykP48025 629 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ephb2P54763 986 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Acot8P58137 320 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Vps45P97390 570 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Rcn1Q05186 325 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 1700061G19RikQ08EE8 705 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Tekt4Q149S1 447 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Ankmy2Q3TPE9 440 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Prmt9Q3U3W5 846 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Cyp4f37Q3V1F1 546 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 UrgcpQ5NCI0 926 aa13.71□□□□□ -0.21
Pdlim5-208ENSMUST00000196220 Serpinb6Q60854 378 aa13.71□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms