RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Trappc3lQ4KL14 181 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Myl6Q60605 151 aaKnown RBP12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Nr0b1Q61066 472 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Ahcyl1Q80SW1 530 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Noc4lQ8BHY2 516 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 UstQ8BUB6 407 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Lin7aQ8JZS0 233 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Wdr98Q8VC42 657 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Fig4Q91WF7 907 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Trex1Q91XB0 314 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Pgam1Q9DBJ1 254 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Tmem2Q5FWI3 1383 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Rfpl4bJ3QPR6 266 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Nat9Q3UG98 241 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Proser1Q5PRE5 913 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 HadhQ61425 314 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Senp7Q8BUH8 1037 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Actr8Q8R2S9 624 aaKnown RBP12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 DgkgQ91WG7 788 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Use1Q9CQ56 270 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Vmn2r25W4VSP2 855 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Ttc37F8VPK0 1563 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 DbtP53395 482 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Yy1Q00899 414 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Zbtb39Q6PDK0 712 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Zhx3Q8C0Q2 951 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Pkd2l1A2A259 760 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Zfp984A2A7A2 547 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 TecP24604 630 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Fmr1P35922 614 aaKnown RBP12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Csnk2bP67871 215 aaKnown RBP12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Upf3aQ3ULJ3 422 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Sel1l2Q3V172 688 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Magee2Q52KG3 523 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Maml1Q6T264 1020 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Tmc7Q8C428 726 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 PolbQ8K409 335 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Borcs5Q9D920 195 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Pramef6A2A8M8 474 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Olfr521E9Q519 321 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Igfbp4P47879 254 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Defa8P50706 81 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Kansl2Q8BQR4 486 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Mboat7Q8CHK3 473 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Dlgap1Q9D415 992 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Chd2E9PZM4 1827 aaKnown RBP12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 TxnP10639 105 aaKnown RBP12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Cdk16Q04735 496 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Fam20cQ5MJS3 579 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Otud6aQ6IE21 290 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Mup21Q80YX8 181 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Gpt2Q8BGT5 522 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 SgtaQ8BJU0 315 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Fubp1Q91WJ8 651 aaKnown RBP12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 CenpnQ9CZW2 337 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Gm14781A2A9Q9 366 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Zfp472B0V2W5 534 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 PdgfaP20033 211 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Clhc1Q5M6W3 596 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Slc26a2Q62273 739 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Mrgprb8Q7TN51 330 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 MutyhQ99P21 515 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Mpp2Q9WV34 552 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Gm17333C6EQI3 125 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Trmt1Q3TX08 663 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Tbrg4Q91YM4 630 aaKnown RBP12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Clvs1Q9D4C9 354 aa12.69□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Grik3B1AS29 919 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Msh3P13705 1091 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 NrcamQ810U4 1256 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 4931406P16RikQ8C5X1 1059 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Ddi1Q9DAF3 408 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Ddx20Q9JJY4 825 aaKnown RBP12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Chd5A2A8L1 1946 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 A430078G23RikE9Q7Y4 484 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 ZufspQ3T9Z9 577 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Mup20Q5FW60 181 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Mxd4Q60948 209 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Reep1Q8BGH4 201 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Wwp1Q8BZZ3 918 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Cep72Q9D3R3 646 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Ribc2Q9D4Q1 309 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 PaicsQ9DCL9 425 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Stk4Q9JI11 487 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Dnmt1P13864 1620 aaKnown RBP12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Krt83E9Q1Y9 479 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Plk1Q07832 603 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Mrps31Q61733 384 aaKnown RBP12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Smndc1Q8BGT7 238 aaKnown RBP12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Slc35g1Q8BY79 368 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Tab1Q8CF89 502 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Smpd3Q9JJY3 655 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Abca17E9PX95 1733 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Ccdc7bE9Q9Y3 381 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Oxct1Q9D0K2 520 aaKnown RBP12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Tnfaip8l2Q9D8Y7 184 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 PamP97467 979 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Ntrk3Q6VNS1 825 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Pdzph1Q8BGR1 1238 aa12.68□□□□□ -0.38
Vcpip1-201ENSMUST00000057438 Znf473Q8BI67 892 aa12.68□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms