RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Xlr3bQ6P205 226 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cdkn2aipQ8BI72 563 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Rab36Q8CAM5 267 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mcfd2Q8K5B2 145 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Pcdhb6Q91XZ4 772 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 NwcQ9CQI4 244 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Txndc12Q9CQU0 170 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Kif12Q9D2Z8 642 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 SpastQ9QYY8 614 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Sh2d3cQ9QZS8 854 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ppp1r36D3Z0R2 411 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Vmn2r74E9PW21 853 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Pgbd1E9Q492 415 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 StilQ60988 1262 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Stard3Q61542 446 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cd34Q64314 382 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Asb14Q8C6Y6 587 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tmcc3Q8R310 477 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Olfr615Q8VGY4 313 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 IrgqQ8VIM9 583 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Dhx34Q9DBV3 1145 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 PamP97467 979 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Prr7Q3V0I2 269 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gcnt3Q5JCT0 437 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Znf496Q5SXI5 585 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Klhl23Q6GQU2 558 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mib1Q80SY4 1006 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Arhgef38Q80VK6 770 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Samd4bQ80XS6 687 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 DgkgQ91WG7 788 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Use1Q9CQ56 270 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Clvs1Q9D4C9 354 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Zswim9Q6DI92 447 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Olfr392Q7TRX6 312 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gpt2Q8BGT5 522 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 PstkQ8BP74 359 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Elp3Q9CZX0 547 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Dlgap1Q9D415 992 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ulk2Q9QY01 1037 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cacna1dQ99246 2179 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gm21972J3QN38 98 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tnk2O54967 1055 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Xirp1O70373 1129 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cyp2d10P24456 504 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Slc1a2P43006 572 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mxd3Q80US8 206 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ptges3Q9R0Q7 160 aaKnown RBP12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Slc26a4Q9R155 780 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 CcniQ9Z2V9 377 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Scgb2b21A0A087WQA9 112 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ccdc163A2AGD7 326 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Armt1A6H630 439 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Olfr521E9Q519 321 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Galnt4O08832 578 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 LtbrP50284 415 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Btbd3P58545 530 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tespa1Q3U132 458 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 CltbQ6IRU5 229 aaKnown RBP12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tas2r115Q7M719 310 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Rft1Q8C3B8 541 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tdrd3Q91W18 743 aaKnown RBP12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tmx2Q9D710 295 aaKnown RBP12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Pgam1Q9DBJ1 254 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 PaicsQ9DCL9 425 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Jph2Q9ET78 696 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Rap1gapA2ALS5 663 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Fcer2P20693 331 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Rpl10aP53026 217 aaKnown RBP12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Esrp1Q3US41 680 aaKnown RBP12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Q5EBG8 199 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tp53i13Q5F267 385 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tspan9Q8BJU2 239 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Abca9Q8K449 1623 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 MaffO54791 156 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Shoc2O88520 582 aaKnown RBP12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 4933427I04RikQ3V053 235 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Nlrp9bQ66X22 1003 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Klhdc10Q6PAR0 439 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tbc1d14Q8CGA2 694 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Acvr1cQ8K348 493 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ppp1r16aQ923M0 524 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Plagl2Q925T4 496 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ergic3Q9CQE7 383 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 CenpnQ9CZW2 337 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 NbnQ9R207 751 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Atn1O35126 1175 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Msh3P13705 1091 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 HmbsP22907 361 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cyp2c39P56656 490 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Anxa4P97429 319 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Yy1Q00899 414 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Znf513Q6PD29 541 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ntrk3Q6VNS1 825 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Atp2c1Q80XR2 918 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Inpp5bQ8K337 993 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Creld1Q91XD7 420 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Dctn2Q99KJ8 402 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 CoprsQ9CQ13 173 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Wwp2Q9DBH0 870 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gjb4Q02738 266 aa12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 64.9 ms