RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Chrna9G3X8Z7 479 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mup13L7N222 235 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ptch2O35595 1182 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sdc4O35988 198 aaKnown RBP7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Coro1aO89053 461 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Foxred2Q3USW5 665 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Hsph1Q61699 858 aaKnown RBP7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mrps31Q61733 384 aaKnown RBP7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 DazlQ64368 298 aaKnown RBP7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Pwwp2aQ69Z61 730 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rtl3Q6P1Y1 553 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Frmd5Q6P5H6 517 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Olfr213Q7TS32 327 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Lrrc27Q80YS5 523 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rsad2Q8CBB9 362 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gbp5Q8CFB4 590 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Wdr98Q8VC42 657 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Paip2bQ91W45 136 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ferd3lQ923Z4 168 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Asb11Q9CQ31 323 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Q9D454 513 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 LrgukQ9D5S7 820 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Map3k6Q9WTR2 1291 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Pacsin2Q9WVE8 486 aaKnown RBP7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm1141B9EJU1 475 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Eef1bO70251 225 aaKnown RBP7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Casp4P70343 373 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Krba1Q6NXZ1 1043 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Adam29Q811Q4 763 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Hpcal4Q8BGZ1 191 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Maip1Q8BHE8 291 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 CptpQ8BS40 216 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sh3rf3Q8C120 878 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Armcx6Q8K3A6 301 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tc2nQ91XT6 489 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 4921530L21RikQ9CQ47 274 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rfc5Q9D0F6 339 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Trim42Q9D2H5 723 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Q9D937 123 aaKnown RBP7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 LactbQ9EP89 551 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Actn2Q9JI91 894 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ndrg2Q9QYG0 371 aaKnown RBP7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Kcnd2Q9Z0V2 630 aa7.12□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Adgrf5G5E8Q8 1348 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cep85lA0A1W2P884 806 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mup10A2BIN1 180 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mup14A2CEK7 180 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mup19A9C497 187 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mup15A9R9W0 180 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm382B1AXN3 1250 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mup17B5X0G2 180 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Zfp174B9EJW5 407 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mup8E9PVW0 235 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ccdc144bE9PVZ3 520 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mup7E9QA79 235 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Per3O70361 1113 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mup6P02762 180 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 CkmP07310 381 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mup1P11588 180 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mup2P11589 180 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 PrphP15331 475 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rfx2P48379 717 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sox1P53783 391 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ybx1P62960 322 aaKnown RBP7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Serpina5P70458 405 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nhej1Q3KNJ2 295 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nr1d1Q3UV55 615 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm5168Q4KL04 211 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ddx3xQ62167 662 aaKnown RBP7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rab34Q64008 259 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Dnajc8Q6NZB0 253 aaKnown RBP7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Kcnf1Q7TSH7 493 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Daam1Q8BPM0 1077 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Itpk1Q8BYN3 419 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mettl13Q91YR5 698 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Creld2Q9CYA0 350 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nde1Q9CZA6 344 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Krt7Q9DCV7 457 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cables1Q9ESJ1 568 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Trpm6Q8CIR4 2028 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Vmn2r72D3Z4N8 856 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Speer2E9Q9U2 264 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Scamp3O35609 349 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Pde8aO88502 823 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tagap1P0CAX8 505 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Akr1b8P45377 316 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 FaxcQ3UMF9 409 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fam196aQ3USH1 422 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Stard3Q61542 446 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Six2Q62232 296 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fgfr1opQ66JX5 399 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 RbfaQ6P3B9 350 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Xpo1Q6P5F9 1071 aaKnown RBP7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Arhgap26Q6ZQ82 814 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ddx42Q810A7 929 aaKnown RBP7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Aste1Q8BIR2 672 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Drd5Q8BLD9 478 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Samd3Q8C4H2 520 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cacnb2Q8CC27 655 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Igsf8Q8R366 611 aa7.11□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms