RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Pcdhb6Q91XZ4 772 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 NelfcdQ922L6 591 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Trpc7Q9WVC5 862 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Slc23a1Q9Z2J0 605 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Speer4f2E9Q366 295 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Vmn2r11E9Q4X4 861 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gm3642K7N6V4 267 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Psmc3O88685 442 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Il2P04351 169 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Kcnj6P48542 425 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Flt3lgP49772 232 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Rab6bP61294 208 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Plcl1Q3USB7 1096 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Nr1d1Q3UV55 615 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Mon1aQ6PDG8 556 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Enoph1Q8BGB7 257 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tmx4Q8C0L0 335 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Agbl3Q8CDP0 1006 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ulbp1Q8HWA3 334 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pnpt1Q8K1R3 783 aaKnown RBP8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gsto2Q8K2Q2 248 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Slc26a7Q8R2Z3 656 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ppp6r2Q8R3Q2 923 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ddx1Q91VR5 740 aaKnown RBP8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Lims2Q91XD2 341 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Vangl2Q91ZD4 521 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tfap2dQ91ZK0 452 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Fads1Q920L1 447 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 NonoQ99K48 473 aaKnown RBP8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Mrpl9Q99N94 265 aaKnown RBP8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tdrd12Q9CWU0 1215 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Thg1lQ9CY52 298 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Dcp2Q9CYC6 422 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Snf8Q9CZ28 258 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tmco5aQ9D9D5 303 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 ParvbQ9ES46 365 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Magel2Q9QZ04 1284 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gpr161B2RPY5 545 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gm5689F6Y2A6 97 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Vmn2r111K7N674 857 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 KlO35082 1014 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Emilin3P59900 758 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Hoxd13P70217 339 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Sec1P97353 368 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Fmo3P97501 534 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 KrtdapQ3V2T4 102 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gm14685Q52KH6 695 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Slc6a4Q60857 630 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 StilQ60988 1262 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 TCAIMQ66JZ4 499 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pwp2Q8BU03 919 aaKnown RBP8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Samd3Q8C4H2 520 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Efcab8Q8C9R9 203 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Igsf8Q8R366 611 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ccdc71Q8VEG0 433 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Trim60Q8VI40 466 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Smc6Q924W5 1097 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Hsf2bpQ9D4G2 338 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tspan17Q9D7W4 270 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Cog1Q9Z160 980 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gm11983V9GXS8 105 aa8.99□□□□□ -0.97
Trim39-201ENSMUST00000042717 Skint6A7XUZ6 1240 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Adamts6D3Z1A5 1117 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Zc3h12bG3X9I7 835 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Smpd2O70572 419 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 ZfaP23607 742 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Drg1P32233 367 aaKnown RBP8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 SftpbP50405 377 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Smad1P70340 465 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ddr1Q03146 911 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Igfbp7Q61581 281 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Atp11bQ6DFW5 1175 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Mis18bp1Q80WQ8 998 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Hmgxb4Q80Y32 594 aaKnown RBP8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Dupd1Q8BK84 215 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Lrrc4cQ8C031 640 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Lpin1Q91ZP3 924 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 FdpsQ920E5 353 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Themis3Q9CU24 569 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Q9D454 513 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Kifc1Q9QWT9 674 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Map3k6Q9WTR2 1291 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Mmrn1B2RPV6 1210 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Znf518bB2RRE4 1077 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 5830411N06RikB3F5L4 1112 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ccdc24E9PUW8 296 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Zfp597E9Q6S0 419 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Cdh18E9Q9Q6 790 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pcsk6F6XJP7 959 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pcdh9F8VPK8 1237 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 St3gal1P54751 337 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Grb7Q03160 535 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Dennd1bQ3U1T9 766 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Nfe2l2Q60795 597 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Olfr20Q7TRX9 314 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Chn2Q80XD1 332 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Nup54Q8BTS4 510 aaKnown RBP8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Fam53cQ8BXQ8 393 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Rbm34Q8C5L7 375 aaKnown RBP8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Nlrp4bQ8C6J9 863 aa8.98□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms