RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Mterf4Q8BVN4 346 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Olfr532Q8VGT4 309 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Snx29Q9D3S3 818 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Nup50Q9JIH2 466 aaKnown RBP16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Disp2Q8CIP5 1345 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Kcnj11Q61743 390 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 TbcdQ8BYA0 1196 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Scara3Q8C850 606 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Ccdc63Q8CDV6 558 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Syf2Q9D198 242 aaKnown RBP16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Duoxa2Q9D311 320 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Fam187aQ9D3R5 417 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Cyp3a44Q9EQW4 504 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 DccP70211 1447 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Smok3aC0HKC8 504 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Smok3bC0HKC9 504 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 TecP24604 630 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Stt3bQ3TDQ1 823 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Prrg3Q6PAQ9 231 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Gpr141Q7TQP0 305 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Ndufs1Q91VD9 727 aaKnown RBP16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Pdpk1Q9Z2A0 559 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Chd1P40201 1711 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Cyp2t4E9PWV0 503 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 IdsQ08890 552 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Grid2ipQ0QWG9 1203 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Ppm1jQ149T7 507 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Klrg2Q3UM83 387 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Sema4bQ62179 823 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Krt42Q6IFX2 452 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Gpbp1l1Q6NZP2 473 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Btbd10Q80X66 475 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Setdb2Q8C267 713 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Rasal3Q8C2K5 1041 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 2010005H15RikQ9D8D6 97 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Irx5Q9JKQ4 484 aa16.99■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Gm3526E9PZM0 191 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Spata31d1dE9Q5W2 1247 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Hk2O08528 917 aaKnown RBP16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Surf2P09926 257 aaKnown RBP16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Hoxa11P31311 313 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Fam131bQ3TY60 332 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Shroom1Q5SX79 823 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Mtnr1aQ61184 353 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Nr6a1Q64249 495 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Prkaa2Q8BRK8 552 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Epn3Q91W69 636 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Chst15Q91XQ5 561 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Kif1cO35071 1100 aaKnown RBP16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Ets2P15037 468 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Ptpn5P54830 541 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Lrrc47Q505F5 581 aaKnown RBP16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Olfr412Q7TRW7 312 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Wscd1Q80XH4 572 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Timm50Q9D880 353 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Serpinb9bQ9DAV6 377 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Dlc1Q9R0Z9 1092 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Pitpnm2Q6ZPQ6 1335 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Pcdh7A0A0A6YY83 1255 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Hsd17b7O88736 334 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Mcpt4P21812 246 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 RalgdsQ03385 852 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Q8BGC1 442 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Olfr30Q8VGD8 315 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Ino80bQ99PT3 375 aaKnown RBP16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Olfr391-psA0A0U1RNJ4 312 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Zfp990B1AVN5 605 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 H2-Eb1P04230 264 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Dsg1bQ7TSF1 1060 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Ifi44Q8BV66 422 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 CatsperzQ9CQP8 194 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Smad9Q9JIW5 430 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Trpm5Q9JJH7 1158 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Iigp1Q9QZ85 413 aa16.98■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Hnrnph3D3Z3N4 346 aaKnown RBP16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Cdk7Q03147 346 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Zfp560Q3URI6 754 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Cep295nlQ497N6 533 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Bcap31Q61335 245 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Stx18Q8VDS8 334 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 CarfQ8VHI4 689 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Dctn3Q9Z0Y1 186 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Gm8237E9Q257 205 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Cdk14O35495 469 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Il1rapl1P59823 695 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Rbm44Q3V089 1013 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Slitrk2Q810C0 846 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Teddm1aQ810U2 305 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Trim31Q8R0K2 507 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Cdc16Q8R349 620 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 TgdsQ8VDR7 355 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Ndufb5Q9CQH3 189 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Cdyl2Q9D5D8 503 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Gm28168A0A087WNP1 180 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Dcdc2bF7BCK0 340 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Tekt5G5E8A8 557 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Gm8011K7N6Y5 207 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Tpst1O70281 370 aa16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Scp2P32020 547 aaKnown RBP16.97■□□□□ 0.31
Ubfd1-201ENSMUST00000033158 Zfp217Q3U0X6 1041 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms