RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Il6stQ00560 917 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 PtprrQ62132 656 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Arl5cQ6P068 179 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Ccdc184Q8BMK5 191 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Galnt5Q8C102 930 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Sulf1Q8K007 870 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Cnot6Q8K3P5 557 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Tmco4Q91WU4 631 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Nde1Q9CZA6 344 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Fam227bQ9D518 532 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Slc4a11A2AJN7 862 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Gm10719E9Q7T3 227 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Morc3F7BJB9 942 aaKnown RBP18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Gm20509G3UZF1 325 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 EsrraO08580 422 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Wdr91Q7TMQ7 748 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Pnma2Q8BHK0 365 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Gpr20Q8BYC4 358 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Msi2Q920Q6 346 aaKnown RBP18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Tekt1Q9DAJ2 418 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Trpc5Q9QX29 975 aa18.3■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Dhx35A2ACQ1 703 aaKnown RBP18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Tac1P41539 130 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Znf219Q6IQX8 726 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Gabra5Q8BHJ7 463 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Dis3lQ8C0S1 1053 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Pacs1Q8K212 961 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Ssu72Q9CY97 194 aaKnown RBP18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Tspan3Q9QY33 253 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Vmn2r84D3YWE3 849 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Grpel2O88396 224 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 CfhP06909 1234 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 GapdhsQ64467 440 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 TdrkhQ80VL1 560 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Armc12Q80X86 340 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Ankrd45Q810N6 248 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Kansl2Q8BQR4 486 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Brat1Q8C3R1 822 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Rmnd1Q8CI78 450 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 TwnkQ8CIW5 685 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Asb7Q91ZU0 318 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Unc45aQ99KD5 944 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Mrps17Q9CQE3 120 aaKnown RBP18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Fbxo16Q9QZM9 334 aa18.29■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Rabgap1lA6H6A9 815 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 DmpkP54265 631 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Ranbp9P69566 653 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Pak5Q8C015 719 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Zcchc14Q8VIG0 956 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Hdhd5Q91WM2 419 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 LipaQ9Z0M5 397 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Ighv11-2A0A075B5R8 117 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Pex10B1AUE5 324 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Vmn2r72D3Z4N8 856 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Soat2O88908 525 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Ccr5P51682 354 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 AcdQ5EE38 416 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Arhgap1Q5FWK3 439 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Ankrd6Q69ZU8 712 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Tas2r125Q7M710 311 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Zbtb5Q7TQG0 670 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Lrrc27Q80YS5 523 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Grik4Q8BMF5 956 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 SowahcQ8C0J6 512 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 EtfbQ9DCW4 255 aaKnown RBP18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Sbno2Q7TNB8 1349 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Gm6657A0A1B0GRJ3 277 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Zbed6D2EAC2 980 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 BpgmP15327 259 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Wnt3aP27467 352 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Cyp2f2P33267 491 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Mpp1P70290 466 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Tmprss15P97435 1069 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Foxred2Q3USW5 665 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Otol1Q4ZJM7 482 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Atp2a3Q64518 1038 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Rad9bQ6WBX7 403 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Ccdc80Q8R2G6 949 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Sh3kbp1Q8R550 709 aaKnown RBP18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Tas1r3Q925D8 858 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Ggt7Q99JP7 662 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Tle2Q9WVB2 767 aa18.28■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Adcy6Q01341 1165 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Tmem26Q3UP23 366 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Fam189a2Q4FZH1 290 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Trim38Q5SZ99 471 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 RgnQ64374 299 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Got1l1Q7TSV6 404 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Ppm1lQ8BHN0 360 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Arhgap8Q9CXP4 425 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Aldh1b1Q9CZS1 519 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Elp3Q9CZX0 547 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Prl2a1Q9JHK0 228 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 PolhQ9JJN0 694 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Zfp358E9Q8M1 571 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Sypl2O89104 264 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Als2clQ60I26 952 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Znf148Q61624 794 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 PigaQ64323 485 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Zfp512bQ6PHP4 879 aa18.27■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms