RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Best2Q8BGM5 508 aa11.29□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Efcab14Q8BGQ6 484 aa11.29□□□□□ -0.6
Tubb1-201ENSMUST00000016399 B130006D01RikQ8BRH6 153 aa11.29□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Prpf39Q8K2Z2 665 aa11.29□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Vmn1r188Q8K3N2 308 aa11.29□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Il36gQ8R460 164 aa11.29□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Wdr98Q8VC42 657 aa11.29□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Pcdhb1Q91Y08 818 aa11.29□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Ugp2Q91ZJ5 508 aa11.29□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Nfu1Q9QZ23 255 aa11.29□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Btbd18A0A0A6YY25 723 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Pcdh7A0A0A6YY83 1255 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Vsig10l2A0A140LHF2 776 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 R3hdmlA2A5I3 253 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Tldc2A2ACG1 198 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 4930558K02RikE0CXC6 182 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Zbtb11G5E8B9 1050 aaKnown RBP11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Pja1O55176 578 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Dll3O88516 592 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Tagap1P0CAX8 505 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Ptk2P34152 1090 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Apobec1P51908 229 aaKnown RBP11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Psmb7P70195 277 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Nucb2P81117 420 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 MlxipQ2VPU4 917 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Trappc9Q3U0M1 1148 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Foxr1Q3UTB7 268 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Tmem237Q3V0J1 427 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 HecaQ3V1N5 544 aaKnown RBP11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Serpinb6Q60854 378 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Fgfr1opQ66JX5 399 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Naif1Q6PFD7 327 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Rhbdf2Q80WQ6 827 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Creb3l2Q8BH52 521 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Ldlrap1Q8C142 308 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Kat14Q8CID0 779 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Gspt1Q8R050 636 aaKnown RBP11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Chn1Q91V57 459 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Ddx1Q91VR5 740 aaKnown RBP11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Pcdhgb1Q91XX8 918 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Elmod3Q91YP6 381 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Slc25a11Q9CR62 314 aaKnown RBP11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Llcfc1Q9D9P8 108 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 ParvaQ9EPC1 372 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Mfap5Q9QZJ6 164 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Itpr1P11881 2749 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Ralgapa1Q6GYP7 2035 aa11.28□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Nxpe3B9EKK6 559 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Slc35g2D3YVE8 412 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Ccdc144bE9PVZ3 520 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Gm5415E9PXF3 478 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Rad51ap2G3UW63 976 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Zfp850J3QPC5 689 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Ring1O35730 406 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Cldn2O88552 230 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Becn1O88597 448 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Pim1P06803 397 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Wipf3P0C7L0 485 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 RdxP26043 583 aaKnown RBP11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Slc1a1P51906 523 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 AxlQ00993 888 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Fam172aQ3TNH5 417 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Ceacam5Q3UKK2 947 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Nxf2Q4ZGD8 691 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Klra5Q60652 266 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Sec23ipQ6NZC7 998 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Cacna2d2Q6PHS9 1154 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Sox11Q7M6Y2 395 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Ldoc1Q7TPY9 151 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Mib1Q80SY4 1006 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Adcy2Q80TL1 1090 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Gpt2Q8BGT5 522 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Bend7Q8BSV3 434 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Pnma3Q8JZW8 466 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Cox18Q8VC74 331 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Prc1Q99K43 603 aaKnown RBP11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Q9CQM1 111 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Acsl3Q9CZW4 720 aaKnown RBP11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Spata17Q9D552 379 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Strn3Q9ERG2 796 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 IvdQ9JHI5 424 aa11.27□□□□□ -0.6
Tubb1-201ENSMUST00000016399 Nhsl2B1AXH1 854 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Fam71aB7XG49 585 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Vmn2r84D3YWE3 849 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 CraddO88843 199 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Fcgr1P26151 404 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Slc1a2P43006 572 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 IvlP48997 467 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 CtscP97821 462 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Brms1lQ3U1T3 323 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Rnf10Q3UIW5 804 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Zbtb16Q3UQ17 673 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Syne3Q4FZC9 975 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Ttf2Q5NC05 1138 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Ctc1Q5SUQ9 1212 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 BadQ61337 204 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Msi1Q61474 362 aaKnown RBP11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Sema4cQ64151 834 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 TCAIMQ66JZ4 499 aa11.26□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Hmgb4Q6P8W9 181 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms