RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Mageb3Q9D2H4 330 aa17.33■□□□□ 0.37
Ctcf-201ENSMUST00000005841 GmprQ9DCZ1 345 aa17.33■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Sh3glb1Q9JK48 365 aa17.33■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Edil3O35474 480 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Serpinh1P19324 417 aaKnown RBP17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Tuba4aP68368 448 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Prr7Q3V0I2 269 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Samhd1Q60710 627 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ppm1lQ8BHN0 360 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ccdc159Q8C963 411 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mkl1Q8K4J6 964 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 WaslQ91YD9 501 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mrps17Q9CQE3 120 aaKnown RBP17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Utp11Q9CZJ1 253 aaKnown RBP17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Wdr89Q9D0R9 386 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 PorcnQ9JJJ7 461 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gadd45gQ9Z111 159 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 PhipQ8VDD9 1821 aaKnown RBP17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Dnajb6O54946 365 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Cbfa2t2O70374 594 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mcpt1P11034 246 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 TxkP42682 527 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Aldh3a1P47739 453 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 1810065E05RikQ5NC41 235 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Myl6Q60605 151 aaKnown RBP17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 ItchQ8C863 864 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Pacs1Q8K212 961 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Evi2bQ8VD58 444 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Lmcd1Q8VEE1 365 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Tmco5aQ9D9D5 303 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Rhox9Q9EQM5 227 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Tmod2Q9JKK7 351 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Piwil1Q9JMB7 862 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ripk3Q9QZL0 486 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Fem1bQ9Z2G0 627 aa17.33■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ptpn3A2ALK8 913 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Rabgap1lA6H6A9 815 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Cpb1B2RS76 415 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Zar1lC3VD30 291 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 DcxO88809 366 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Hoxc6P10629 235 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 L1camP11627 1260 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Eml1Q05BC3 814 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Catsper3Q80W99 395 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Phactr3Q8BYK5 558 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Syt15Q8C6N3 418 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gsg1Q8R1W2 324 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Vps11Q91W86 941 aaKnown RBP17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Polr3fQ921X6 316 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 AunipE9Q6Z5 340 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Foxm1O08696 760 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Nek2O35942 443 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 DffaO54786 331 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Cbx3P23198 183 aaKnown RBP17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ccna2P51943 422 aaKnown RBP17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 PrkacbP68181 351 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Il15raQ60819 263 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 ChpfQ6IQX7 774 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Znf618Q80YY7 953 aaKnown RBP17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Slc35f5Q8R314 524 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Alg9Q8VDI9 611 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Usp3Q91W36 520 aaKnown RBP17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Glra3Q91XP5 464 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Olr1Q9EQ09 363 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 0610012G03RikA0A0J9YTR2 95 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Slc27a3O88561 667 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 CiitaP79621 1155 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 SybuQ8BHS8 665 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gtf3c4Q8BMQ2 817 aaKnown RBP17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Slc30a5Q8R4H9 761 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Slc5a9Q8VDT1 685 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Atp13a1Q9EPE9 1200 aaKnown RBP17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Slc13a2Q9ES88 586 aa17.32■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Dock1Q8BUR4 1865 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Olfr271-ps1A0A1L1SQH2 283 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Matn2O08746 956 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ephx2P34914 554 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Pdss1Q33DR2 409 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Hspa1aQ61696 641 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 CbarpQ66L44 698 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Fastkd1Q6DI86 829 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gpatch2lQ6PE65 482 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Best2Q8BGM5 508 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Slc12a9Q99MR3 914 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 NplQ9DCJ9 320 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Tmem59Q9QY73 323 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gm45861A0A1B0GRY3 1923 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Rabgap1A2AWA9 1064 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Emp3O35912 163 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Cyp2b19O55071 492 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gsta1P13745 223 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Nat1P50294 290 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Q32M26 199 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gsta1Q6P8Q0 223 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 IfneQ80ZF2 192 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Atp5c1Q91VR2 298 aaKnown RBP17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Trem1Q9JKE2 230 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Zscan12Q9Z1D7 501 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 MafbP54841 323 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Lzts1P60853 599 aa17.31■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms