RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 DSTYKQ6XUX3 929 aa17.53■□□□□ 0.4
PHGDH-229ENST00000641891 SH2D5Q6ZV89 423 aa17.53■□□□□ 0.4
PHGDH-229ENST00000641891 SLC7A14Q8TBB6 771 aa17.53■□□□□ 0.4
PHGDH-229ENST00000641891 TRIB2Q92519 343 aa17.53■□□□□ 0.4
PHGDH-229ENST00000641891 RXFP1Q9HBX9 757 aa17.53■□□□□ 0.4
PHGDH-229ENST00000641891 ZFYVE28Q9HCC9 887 aa17.53■□□□□ 0.4
PHGDH-229ENST00000641891 SLC38A7Q9NVC3 462 aa17.53■□□□□ 0.4
PHGDH-229ENST00000641891 GABRQQ9UN88 632 aa17.53■□□□□ 0.4
PHGDH-229ENST00000641891 FAM72CH0Y354 149 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 I6L893 689 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-229ENST00000641891 LPXNO60711 386 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 MYCNP04198 464 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-229ENST00000641891 CSH1P0DML2 217 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 CSH2P0DML3 217 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 TPSB2P20231 275 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 AP1B1Q10567 949 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 BNIP1Q12981 228 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 SEMA5AQ13591 1074 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 TPSAB1Q15661 275 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 PAN2Q504Q3 1202 aaKnown RBP17.52■□□□□ 0.4
PHGDH-229ENST00000641891 FAM72AQ5TYM5 149 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 FAM72DQ6L9T8 149 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 OTOAQ7RTW8 1153 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 SAPCD2Q86UD0 394 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 SLC26A11Q86WA9 606 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 FAM72BQ86X60 149 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 STAP1Q9ULZ2 295 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 SCN10AQ9Y5Y9 1956 aa17.52■□□□□ 0.4
PHGDH-229ENST00000641891 A0A0A0MRY4 1105 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 TRIM49D1C9J1S8 452 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 H3BRJ5 948 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 TM9SF1O15321 606 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 MGEA5O60502 916 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 APOEP02649 317 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 USP17L7P0C7H9 530 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 PRKCHP24723 683 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 NEK3P51956 506 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 DAOAP59103 153 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 BMPR2Q13873 1038 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 C4orf22Q6V702 233 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 PTPRN2Q92932 1015 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 APOPT1Q96IL0 206 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 SPATA13Q96N96 652 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 SEPT10Q9P0V9 454 aa17.52■□□□□ 0.39
PHGDH-229ENST00000641891 RCOR3Q9P2K3 495 aaPredicted RBP17.52■□□□□ 0.39
PHGDH-229ENST00000641891 RNF103O00237 685 aa17.51■□□□□ 0.39
PHGDH-229ENST00000641891 CRADDP78560 199 aa17.51■□□□□ 0.39
PHGDH-229ENST00000641891 MGAT3Q09327 533 aa17.51■□□□□ 0.39
PHGDH-229ENST00000641891 TBC1D1Q86TI0 1168 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-229ENST00000641891 SERINC5Q86VE9 423 aa17.51■□□□□ 0.39
PHGDH-229ENST00000641891 LRRC6Q86X45 466 aa17.51■□□□□ 0.39
PHGDH-229ENST00000641891 COLGALT1Q8NBJ5 622 aa17.51■□□□□ 0.39
PHGDH-229ENST00000641891 ALKBH8Q96BT7 664 aaKnown RBP17.51■□□□□ 0.39
PHGDH-229ENST00000641891 P2RY11Q96G91 374 aa17.51■□□□□ 0.39
PHGDH-229ENST00000641891 FAM111AQ96PZ2 611 aa17.51■□□□□ 0.39
PHGDH-229ENST00000641891 EBNA1BP2Q99848 306 aaKnown RBP17.51■□□□□ 0.39
PHGDH-229ENST00000641891 PLCD4Q9BRC7 762 aa17.51■□□□□ 0.39
PHGDH-229ENST00000641891 TRIM33Q9UPN9 1127 aa17.51■□□□□ 0.39
PHGDH-229ENST00000641891 HACD1B0YJ81 288 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 EEF2KO00418 725 aaKnown RBP17.5■□□□□ 0.39
PHGDH-229ENST00000641891 CAPN9O14815 690 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 SLC10A3P09131 477 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 CD52P31358 61 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 LHX1P48742 406 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 KCNJ2P63252 427 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 SLC18A2Q05940 514 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 DPYSQ14117 519 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 PRKD1Q15139 912 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-229ENST00000641891 TIGD5Q53EQ6 642 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 TTC39BQ5VTQ0 682 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-229ENST00000641891 CDHR3Q6ZTQ4 885 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 RFX8Q6ZV50 586 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 RSPH3Q86UC2 560 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 PSTKQ8IV42 348 aaKnown RBP17.5■□□□□ 0.39
PHGDH-229ENST00000641891 UNC5BQ8IZJ1 945 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 CCNYQ8ND76 341 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 ZIC5Q96T25 663 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 KPNA6O60684 536 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 TOMM70O94826 608 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 POMCP01189 267 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 ALADP13716 330 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 ELF3P78545 371 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-229ENST00000641891 OVGP1Q12889 678 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 TMEM86AQ8N2M4 240 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 PDCD7Q8N8D1 485 aaKnown RBP17.5■□□□□ 0.39
PHGDH-229ENST00000641891 HASPINQ8TF76 798 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 C10orf82Q8WW14 230 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 LRRC39Q96DD0 335 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 RTP3Q9BQQ7 232 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 MYLK2Q9H1R3 596 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 PRDM12Q9H4Q4 367 aa17.5■□□□□ 0.39
PHGDH-229ENST00000641891 WDR6Q9NNW5 1121 aaKnown RBP17.5■□□□□ 0.39
PHGDH-229ENST00000641891 WDR27A2RRH5 827 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 HHLA1C9JL84 531 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 TRDMT1O14717 391 aaKnown RBP17.49■□□□□ 0.39
PHGDH-229ENST00000641891 FAM163BP0C2L3 166 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 NCAM1P13591 858 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 THPOP40225 353 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 ETV4P43268 484 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 UPP1Q16831 310 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms