RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PREPLQ4J6C6 727 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-222ENST00000641587 FKBP15Q5T1M5 1219 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 SARM1Q6SZW1 724 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 CCNI2Q6ZMN8 369 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-222ENST00000641587 HTR3DQ70Z44 454 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 INTS8Q75QN2 995 aaKnown RBP10.53□□□□□ -0.72
PHGDH-222ENST00000641587 PDZD3Q86UT5 571 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 C12orf29Q8N999 325 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 SLC2A14Q8TDB8 520 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 TOE1Q96GM8 510 aaKnown RBP10.53□□□□□ -0.72
PHGDH-222ENST00000641587 XPO6Q96QU8 1125 aaKnown RBP10.53□□□□□ -0.72
PHGDH-222ENST00000641587 XPO4Q9C0E2 1151 aaKnown RBP10.53□□□□□ -0.72
PHGDH-222ENST00000641587 MKRN2Q9H000 416 aaKnown RBP10.53□□□□□ -0.72
PHGDH-222ENST00000641587 NMUR1Q9HB89 426 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.53□□□□□ -0.723e-8■■■■■ 240.4
PHGDH-222ENST00000641587 PCDHB9Q9Y5E1 797 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 SLCO1B1Q9Y6L6 691 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 ATP8B3O60423 1300 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 TMEM131Q92545 1883 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 LRRIQ3A6PVS8 624 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-222ENST00000641587 MEI4A8MW99 385 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 MAPK13O15264 365 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 VNN1O95497 513 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 FAM163BP0C2L3 166 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 CISD3P0C7P0 127 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 TRIM49P0CI25 452 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 TRIM49CP0CI26 452 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 ADORA2BP29275 332 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 CD6P30203 668 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 ATICP31939 592 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 IL12RB1P42701 662 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 VAMP7P51809 220 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 ZNF75DP51815 510 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 MARSP56192 900 aaKnown RBP10.52□□□□□ -0.73
PHGDH-222ENST00000641587 UBXN1Q04323 297 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 GEN1Q17RS7 908 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 ZNF667Q5HYK9 610 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 SPOPLQ6IQ16 392 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 SDE2Q6IQ49 451 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 NUDT18Q6ZVK8 323 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 TRIM59Q8IWR1 403 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 DRC7Q8IY82 874 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 TMEM174Q8WUU8 243 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 HNRNPLLQ8WVV9 542 aaKnown RBP10.52□□□□□ -0.73
PHGDH-222ENST00000641587 TNIP3Q96KP6 325 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 NAP1L5Q96NT1 182 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-222ENST00000641587 BBC3Q96PG8 261 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-222ENST00000641587 GPR174Q9BXC1 333 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 MIR1-1HGQ9H1L0 117 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 CCDC86Q9H6F5 360 aaKnown RBP10.52□□□□□ -0.73
PHGDH-222ENST00000641587 WSB2Q9NYS7 404 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-222ENST00000641587 MARK1Q9P0L2 795 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 PCOLCE2Q9UKZ9 415 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 FNDC3AQ9Y2H6 1198 aaKnown RBP10.52□□□□□ -0.73
PHGDH-222ENST00000641587 RAXQ9Y2V3 346 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 STON1Q9Y6Q2 735 aa10.52□□□□□ -0.73
PHGDH-222ENST00000641587 CKAP5Q14008 2032 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 KNL1Q8NG31 2342 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 A0A1W2PQH9 124 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 LGALS16A8MUM7 142 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 HHLA1C9JL84 531 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 ZBTB24O43167 697 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-222ENST00000641587 STX10O60499 249 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 AFPP02771 609 aaKnown RBP10.51□□□□□ -0.73
PHGDH-222ENST00000641587 NCAM1P13591 858 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 GNSP15586 552 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 NDST1P52848 882 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 DLG4P78352 724 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 SLC14A1Q13336 389 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 NCOA4Q13772 614 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 HNRNPDQ14103 355 aaKnown RBP10.51□□□□□ -0.73
PHGDH-222ENST00000641587 VWA3BQ502W6 1294 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 WDR45BQ5MNZ6 344 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 SYCP2LQ5T4T6 812 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 DCAF12L1Q5VU92 463 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 Q6ZNB5 142 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 CLEC20AQ6ZU45 233 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 CRELD1Q96HD1 420 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 PCMTD1Q96MG8 357 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-222ENST00000641587 TWNKQ96RR1 684 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 NDST4Q9H3R1 872 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 FAM124BQ9H5Z6 455 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-222ENST00000641587 GAREM1Q9H706 876 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 VRTNQ9H8Y1 702 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 PRDM16Q9HAZ2 1276 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 CSNK1G1Q9HCP0 422 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 CYLDQ9NQC7 956 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 TLR8Q9NR97 1041 aaKnown RBP10.51□□□□□ -0.73
PHGDH-222ENST00000641587 TOR4AQ9NXH8 423 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 USP36Q9P275 1121 aaKnown RBP10.51□□□□□ -0.73
PHGDH-222ENST00000641587 WDR35Q9P2L0 1181 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 SUSD2Q9UGT4 822 aa10.51□□□□□ -0.73
PHGDH-222ENST00000641587 LSM7Q9UK45 103 aaKnown RBP10.51□□□□□ -0.73
PHGDH-222ENST00000641587 GOLGA4Q13439 2230 aaKnown RBP10.51□□□□□ -0.73
PHGDH-222ENST00000641587 A0A1B0GTH6 734 aa10.5□□□□□ -0.73
PHGDH-222ENST00000641587 A0A1B0GTW7 788 aa10.5□□□□□ -0.73
PHGDH-222ENST00000641587 GOLGA8CPA6NN73 597 aa10.5□□□□□ -0.73
PHGDH-222ENST00000641587 CILPO75339 1184 aa10.5□□□□□ -0.73
PHGDH-222ENST00000641587 STC2O76061 302 aa10.5□□□□□ -0.73
PHGDH-222ENST00000641587 ZIC2O95409 532 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms