RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ARL4CP56559 192 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 SARNPP82979 210 aaKnown RBP10.06□□□□□ -0.8
PHGDH-215ENST00000641371 GABPB1Q06547 395 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-215ENST00000641371 RING1Q06587 406 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 IFFO1Q0D2I5 559 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 MMRN1Q13201 1228 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 SEMA3BQ13214 749 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 EIF4EBP2Q13542 120 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-215ENST00000641371 VEPH1Q14D04 833 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 LLGL1Q15334 1064 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 CCDC142Q17RM4 750 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 TCTN1Q2MV58 587 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 MGAT5BQ3V5L5 792 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 RFX8Q6ZV50 586 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 HFE2Q6ZVN8 426 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 RTL10Q7L3V2 364 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 TAC4Q86UU9 113 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 ARFGAP2Q8N6H7 521 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 ATP6V0D2Q8N8Y2 350 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 PHOSPHO2Q8TCD6 241 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 TFB1MQ8WVM0 346 aaKnown RBP10.06□□□□□ -0.8
PHGDH-215ENST00000641371 C1orf74Q96LT6 269 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 ZIM3Q96PE6 472 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 YME1L1Q96TA2 773 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 VAT1Q99536 393 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 TMEM121Q9BTD3 319 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 UBE2OQ9C0C9 1292 aaKnown RBP10.06□□□□□ -0.8
PHGDH-215ENST00000641371 NEUROG2Q9H2A3 272 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 PLEKHA4Q9H4M7 779 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 PRDM10Q9NQV6 1147 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 ARHGEF4Q9NR80 690 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 TMEM30AQ9NV96 361 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 UXTQ9UBK9 157 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-215ENST00000641371 PLAAQ9Y263 795 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 ATP8A1Q9Y2Q0 1164 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 GREB1Q4ZG55 1949 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 F8W810 466 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 AP3B1O00203 1094 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 OPHN1O60890 802 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 GCATO75600 419 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 SPAG6O75602 509 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 C1RP00736 705 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 CSF2RAP15509 400 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 PECAM1P16284 738 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-215ENST00000641371 GOT1P17174 413 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 TFE3P19532 575 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-215ENST00000641371 HOXC13P31276 330 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 PHBP35232 272 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 GGCXP38435 758 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 MAGEA6P43360 314 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 TUBP50607 506 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 RAB33AQ14088 237 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 DPYSQ14117 519 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 TRADDQ15628 312 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 CA9Q16790 459 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 RTP2Q5QGT7 225 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 C6orf118Q5T5N4 469 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 RNASEH2BQ5TBB1 312 aaKnown RBP10.05□□□□□ -0.8
PHGDH-215ENST00000641371 AGBL2Q5U5Z8 902 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 SNX30Q5VWJ9 437 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 NCBP2-AS2Q69YL0 99 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 KLHDC10Q6PID8 442 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 UNC45BQ8IWX7 931 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 PDIK1LQ8N165 341 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 VPS52Q8N1B4 723 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 RIBC1Q8N443 379 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-215ENST00000641371 COLGALT1Q8NBJ5 622 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 TSEN2Q8NCE0 465 aaKnown RBP10.05□□□□□ -0.8
PHGDH-215ENST00000641371 STKLD1Q8NE28 680 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 ZNF461Q8TAF7 563 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 RIN2Q8WYP3 895 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-215ENST00000641371 EXOC4Q96A65 974 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 LRRC39Q96DD0 335 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 TBC1D31Q96DN5 1066 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 GDAP1L1Q96MZ0 367 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 OLFM3Q96PB7 478 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 TKTL2Q9H0I9 626 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 GPATCH2LQ9NWQ4 482 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 HBS1LQ9Y450 684 aaKnown RBP10.05□□□□□ -0.8
PHGDH-215ENST00000641371 FARP1Q9Y4F1 1045 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-215ENST00000641371 INSL6Q9Y581 213 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 HEY1Q9Y5J3 304 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 CDY1Q9Y6F8 540 aa10.05□□□□□ -0.8
PHGDH-215ENST00000641371 A0A1W2PQH9 124 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 TRIM43BA6NCK2 446 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 GOLGA6CA6NDK9 693 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 WASH4PA8MWX3 477 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 AGPSO00116 658 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 DCLK1O15075 740 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 KCNN4O15554 427 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 RIPK2O43353 540 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 CREB3O43889 395 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 RNF40O75150 1001 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 TCEA3O75764 348 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 ABLIM3O94929 683 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 TTC4O95801 387 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 SYF2O95926 243 aaKnown RBP10.04□□□□□ -0.8
PHGDH-215ENST00000641371 FGBP02675 491 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 GSTA2P09210 222 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 OR4Q2P0C623 313 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms