RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ARID5AQ03989 594 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 GRIK2Q13002 908 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 TRIP4Q15650 581 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-213ENST00000641272 SERPINA13PQ6UXR4 307 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 FAM217AQ8IXS0 508 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 UBR7Q8N806 425 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 CYB5D2Q8WUJ1 264 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 KAT5Q92993 513 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 SMARCE1Q969G3 411 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 SIPA1Q96FS4 1042 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 FAXDC2Q96IV6 333 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 UBXN6Q9BZV1 441 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 OLA1Q9NTK5 396 aaKnown RBP17.45■□□□□ 0.38
PHGDH-213ENST00000641272 ELOVL2Q9NXB9 296 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 ARMCX3Q9UH62 379 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-213ENST00000641272 COQ4Q9Y3A0 265 aa17.45■□□□□ 0.38
PHGDH-213ENST00000641272 NUMA1Q14980 2115 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 GOLGA6L4A6NEF3 574 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 M0QYV0 167 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 CD59P13987 128 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 BRD2P25440 801 aaKnown RBP17.44■□□□□ 0.38
PHGDH-213ENST00000641272 HARS2P49590 506 aaKnown RBP17.44■□□□□ 0.38
PHGDH-213ENST00000641272 TPMTP51580 245 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 COPAP53621 1224 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 MCCD1P59942 119 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-213ENST00000641272 FKBP3Q00688 224 aaKnown RBP17.44■□□□□ 0.38
PHGDH-213ENST00000641272 ENPP2Q13822 863 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 EIF4HQ15056 248 aaKnown RBP17.44■□□□□ 0.38
PHGDH-213ENST00000641272 FNDC3BQ53EP0 1204 aaKnown RBP17.44■□□□□ 0.38
PHGDH-213ENST00000641272 WDR45BQ5MNZ6 344 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 SYCP2LQ5T4T6 812 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 DCAF12L1Q5VU92 463 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 BSPRYQ5W0U4 402 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 PM20D1Q6GTS8 502 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 TMEM270Q6UE05 265 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 TMPRSS6Q8IU80 811 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 RBBP8NLQ8NC74 664 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-213ENST00000641272 CLEC4CQ8WTT0 213 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 TFAP2BQ92481 460 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 SNX19Q92543 992 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 PRCCQ92733 491 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-213ENST00000641272 GATA6Q92908 595 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 FOXJ1Q92949 421 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 ZNF419Q96HQ0 510 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-213ENST00000641272 WSB2Q9NYS7 404 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-213ENST00000641272 SUSD2Q9UGT4 822 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 PCDHB4Q9Y5E5 795 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 AKAP13Q12802 2813 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 CFAP47Q6ZTR5 3102 aa17.44■□□□□ 0.38
PHGDH-213ENST00000641272 NYNRINQ9P2P1 1898 aaKnown RBP17.44■□□□□ 0.38
PHGDH-213ENST00000641272 SMC2O95347 1197 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 SYPP08247 313 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 SETSIPP0DME0 302 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 VDRP11473 427 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 HLA-FP30511 346 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 FMO5P49326 533 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 DAOAP59103 153 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 CCDC40Q4G0X9 1142 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 MPPE1Q53F39 396 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 KLHL10Q6JEL2 608 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 RFWD3Q6PCD5 774 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 CHST9Q7L1S5 443 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 WFDC5Q8TCV5 224 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 ZCCHC14Q8WYQ9 949 aaKnown RBP17.43■□□□□ 0.38
PHGDH-213ENST00000641272 GSDMAQ96QA5 445 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 ABCB8Q9NUT2 735 aa17.43■□□□□ 0.38
PHGDH-213ENST00000641272 PCNX2A6NKB5 2137 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 TP53BP1Q12888 1972 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-213ENST00000641272 TMEM131Q92545 1883 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 SH3BP5O60239 455 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 ACADMP11310 421 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 GNSP15586 552 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 CD44P16070 742 aaKnown RBP17.42■□□□□ 0.38
PHGDH-213ENST00000641272 TBXAS1P24557 533 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-213ENST00000641272 LRRC63Q05C16 580 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 COBLL1Q53SF7 1204 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 PPM1KQ8N3J5 372 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 CHCHD4Q8N4Q1 142 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 ENGASEQ8NFI3 743 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 NT5C1BQ96P26 610 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 ZSWIM1Q9BR11 485 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 FAM124BQ9H5Z6 455 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-213ENST00000641272 ITM2CQ9NQX7 267 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 DNAAF2Q9NVR5 837 aaKnown RBP17.42■□□□□ 0.38
PHGDH-213ENST00000641272 GGA2Q9UJY4 613 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 HBS1LQ9Y450 684 aaKnown RBP17.42■□□□□ 0.38
PHGDH-213ENST00000641272 SLCO1B1Q9Y6L6 691 aa17.42■□□□□ 0.38
PHGDH-213ENST00000641272 A0A1B0GTW7 788 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 GOLGA6L7A0A1B0GV03 622 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 UPK3BL1B0FP48 263 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 UPK3BL2E5RIL1 263 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 PSMA7O14818 248 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 NPC1O15118 1278 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 GJB3O75712 270 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 GABBR2O75899 941 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 PKDCCQ504Y2 493 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 PMF1Q6P1K2 205 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 NAXDQ8IW45 347 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 ARHGEF19Q8IW93 802 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 SLC2A11Q9BYW1 496 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms