RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 PAIP2Q9BPZ3 127 aaKnown RBP15.62■□□□□ 0.09
TRIM3-215ENST00000639856 LRRC4Q9HBW1 653 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 MTMR10Q9NXD2 777 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRIM3-215ENST00000639856 SPAG6O75602 509 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 KRT4P19013 534 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 RPA3P35244 121 aaPredicted RBP15.61■□□□□ 0.09
TRIM3-215ENST00000639856 MSH2P43246 934 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 GATMP50440 423 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 PITX1P78337 314 aaPredicted RBP15.61■□□□□ 0.09
TRIM3-215ENST00000639856 MRPS5P82675 430 aaKnown RBP15.61■□□□□ 0.09
TRIM3-215ENST00000639856 XRCC4Q13426 336 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 BFSP2Q13515 415 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 OVOS1Q6IE37 1185 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 HFE2Q6ZVN8 426 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 LRRTM3Q86VH5 581 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 METTL23Q86XA0 190 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 COLGALT2Q8IYK4 626 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 DEFB106AQ8N104 65 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 SIX6OS1Q8N1H7 587 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 DCAKDQ8WVC6 231 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 GRAMD1AQ96CP6 724 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 SUSD3Q96L08 255 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 CYTH2Q99418 400 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 BEGAINQ9BUH8 593 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 FTHL17Q9BXU8 183 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 MAGEB5Q9BZ81 275 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 KLC2Q9H0B6 622 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 OGDHLQ9ULD0 1010 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 PRG3Q9Y2Y8 225 aaPredicted RBP15.61■□□□□ 0.09
TRIM3-215ENST00000639856 NRP1O14786 923 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 PIAS1O75925 651 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 GSTA1P08263 222 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 PTPRDP23468 1912 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 MATKP42679 507 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 MAGEA6P43360 314 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 NR2C2P49116 596 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 PLEKHG4Q58EX7 1191 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 INTS6LQ5JSJ4 861 aaKnown RBP15.61■□□□□ 0.09
TRIM3-215ENST00000639856 SYCP2LQ5T4T6 812 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 C4orf22Q6V702 233 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 RGS9BPQ6ZS82 235 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 NLRC5Q86WI3 1866 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 CDKL3Q8IVW4 592 aaPredicted RBP15.61■□□□□ 0.09
TRIM3-215ENST00000639856 MZB1Q8WU39 189 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 SCLYQ96I15 445 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 PKMYT1Q99640 499 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 ACBD6Q9BR61 282 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 PLCD4Q9BRC7 762 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 ULBP1Q9BZM6 244 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 ABCF3Q9NUQ8 709 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 ETNK2Q9NVF9 386 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 SLC12A4Q9UP95 1085 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 ARL2BPQ9Y2Y0 163 aa15.61■□□□□ 0.09
TRIM3-215ENST00000639856 TCRBV9S1A1TA0A576 114 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 ENPP3O14638 875 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 OR1G1P47890 313 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 GBE1Q04446 702 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 SLC10A2Q12908 348 aaPredicted RBP15.6■□□□□ 0.09
TRIM3-215ENST00000639856 SLC45A4Q5BKX6 768 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 OTUD1Q5VV17 481 aaPredicted RBP15.6■□□□□ 0.09
TRIM3-215ENST00000639856 CGB2Q6NT52 195 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 FAM171BQ6P995 826 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 CCDC185Q8N715 623 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 URGCPQ8TCY9 931 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 SMARCD1Q96GM5 515 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 CSPG4P5Q96PW8 444 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 KCTD15Q96SI1 283 aaPredicted RBP15.6■□□□□ 0.09
TRIM3-215ENST00000639856 PITPNM3Q9BZ71 974 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 TMEM161AQ9NX61 479 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 HCSTQ9UBK5 93 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 PRKAG3Q9UGI9 489 aa15.6■□□□□ 0.09
TRIM3-215ENST00000639856 MKI67P46013 3256 aaKnown RBP15.6■□□□□ 0.09
TRIM3-215ENST00000639856 HHLA1C9JL84 531 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 AVILO75366 819 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 DNAJC8O75937 253 aaPredicted RBP15.59■□□□□ 0.09
TRIM3-215ENST00000639856 ZWINTO95229 277 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 BDNFP23560 247 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 GBP2P32456 591 aaPredicted RBP15.59■□□□□ 0.09
TRIM3-215ENST00000639856 SLC1A5Q15758 541 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 PDK4Q16654 411 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 SLC25A52Q3SY17 297 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 DCAF6Q58WW2 860 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 FAM182AQ5T1J6 154 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 SYPL2Q5VXT5 272 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 AGGF1Q8N302 714 aaeCLIP15.59■□□□□ 0.09
TRIM3-215ENST00000639856 CCDC110Q8TBZ0 833 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 ETNK1Q9HBU6 452 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 DSEQ9UL01 958 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 TANC1Q9C0D5 1861 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 TTC3P53804 2025 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 PITPNM1O00562 1244 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 DAB1O75553 588 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 GCATO75600 419 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 APRTP07741 180 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 OR4Q2P0C623 313 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 USP17L7P0C7H9 530 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 SULT1E1P49888 294 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 CCL23P55773 120 aa15.59■□□□□ 0.09
TRIM3-215ENST00000639856 YWHAZP63104 245 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms