RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 ZNF670Q9BS34 389 aa14.37□□□□□ -0.11
ATRIP-208ENST00000639561 DUSP16Q9BY84 665 aa14.37□□□□□ -0.11
ATRIP-208ENST00000639561 ALG13Q9NP73 1137 aaKnown RBP14.37□□□□□ -0.11
ATRIP-208ENST00000639561 FAM50BQ9Y247 325 aa14.37□□□□□ -0.11
ATRIP-208ENST00000639561 CLUHO75153 1309 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 A0A087WUV0 522 aaPredicted RBP14.36□□□□□ -0.11
ATRIP-208ENST00000639561 A0A0U1RQF3 1178 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 PTPN1P18031 435 aaKnown RBP14.36□□□□□ -0.11
ATRIP-208ENST00000639561 ACADSBP45954 432 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 DPYSL2Q16555 572 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 AGMOQ6ZNB7 445 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 CCDC185Q8N715 623 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 SPPL3Q8TCT6 385 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 TTC25Q96NG3 672 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 ZNF317Q96PQ6 595 aaPredicted RBP14.36□□□□□ -0.11
ATRIP-208ENST00000639561 PAAF1Q9BRP4 392 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 USP29Q9HBJ7 922 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 UBN1Q9NPG3 1134 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 INTS9Q9NV88 658 aaKnown RBP14.36□□□□□ -0.11
ATRIP-208ENST00000639561 HEY1Q9Y5J3 304 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 TTC28Q96AY4 2481 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 TMEM120BA0PK00 339 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 ARL5CA6NH57 179 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 APOL1O14791 398 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 NPR3P17342 541 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 L1CAMP32004 1257 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 BCAR1P56945 870 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 GPX6P59796 221 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 CLEC20AQ6ZU45 233 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 VSIG1Q86XK7 387 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 ANKMY2Q8IV38 441 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 LRRN4Q8WUT4 740 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 SENP8Q96LD8 212 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 CRTAC1Q9NQ79 661 aa14.36□□□□□ -0.11
ATRIP-208ENST00000639561 TIMM13Q9Y5L4 95 aaPredicted RBP14.36□□□□□ -0.11
ATRIP-208ENST00000639561 EXOC1LA0A1B0GW35 172 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 H7C0C1 242 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 NDC80O14777 642 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 THP07101 528 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 TGM2P21980 687 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 STIP1P31948 543 aaKnown RBP14.35□□□□□ -0.11
ATRIP-208ENST00000639561 ATP5OP48047 213 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 NDUFV1P49821 464 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 RAB27AP51159 221 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 SCNN1GP51170 649 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 PITX1P78337 314 aaPredicted RBP14.35□□□□□ -0.11
ATRIP-208ENST00000639561 BASP1P80723 227 aaKnown RBP14.35□□□□□ -0.11
ATRIP-208ENST00000639561 MPP2Q14168 576 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 MDH1BQ5I0G3 518 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 OTUD1Q5VV17 481 aaPredicted RBP14.35□□□□□ -0.11
ATRIP-208ENST00000639561 COLGALT1Q8NBJ5 622 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 POF1BQ8WVV4 589 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 PRMT1Q99873 361 aaKnown RBP14.35□□□□□ -0.11
ATRIP-208ENST00000639561 MRPL9Q9BYD2 267 aaKnown RBP14.35□□□□□ -0.11
ATRIP-208ENST00000639561 DHX35Q9H5Z1 703 aaKnown RBP14.35□□□□□ -0.11
ATRIP-208ENST00000639561 SLC38A7Q9NVC3 462 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 CLDND1Q9NY35 253 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 AP4E1Q9UPM8 1137 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 FAM169AQ9Y6X4 670 aa14.35□□□□□ -0.11
ATRIP-208ENST00000639561 C5orf60A6NFR6 353 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 E7ESA3 106 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 DESP17661 470 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 DRD4P21917 467 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 CYP2F1P24903 491 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 ATP5DP30049 168 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 PPM1AP35813 382 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 LRRC14Q15048 493 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 EP400NLQ6ZTU2 488 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 DEFB106AQ8N104 65 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 MAML1Q92585 1016 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 FAM149B1Q96BN6 582 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 CHMP6Q96FZ7 201 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 NECAB3Q96P71 396 aaPredicted RBP14.34□□□□□ -0.11
ATRIP-208ENST00000639561 CASD1Q96PB1 797 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 KCTD15Q96SI1 283 aaPredicted RBP14.34□□□□□ -0.11
ATRIP-208ENST00000639561 CCDC77Q9BR77 488 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 PHACTR1Q9C0D0 580 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 NRDE2Q9H7Z3 1164 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 VPS37BQ9H9H4 285 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 DDX43Q9NXZ2 648 aaKnown RBP14.34□□□□□ -0.11
ATRIP-208ENST00000639561 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.34□□□□□ -0.11
ATRIP-208ENST00000639561 XPO7Q9UIA9 1087 aaKnown RBP14.34□□□□□ -0.11
ATRIP-208ENST00000639561 REV3LO60673 3130 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 CARNS1A5YM72 827 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 CASTOR2A6NHX0 329 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 MYO1CO00159 1063 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 RBL1P28749 1068 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 MATKP42679 507 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 IFNAR2P48551 515 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 ARL4CP56559 192 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 HYAL1Q12794 435 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 SYCP2LQ5T4T6 812 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 PTCRAQ6ISU1 281 aaPredicted RBP14.34□□□□□ -0.11
ATRIP-208ENST00000639561 PDE12Q6L8Q7 609 aaKnown RBP14.34□□□□□ -0.11
ATRIP-208ENST00000639561 ZNF598Q86UK7 904 aaKnown RBP14.34□□□□□ -0.11
ATRIP-208ENST00000639561 SRRM1Q8IYB3 904 aaKnown RBP14.34□□□□□ -0.11
ATRIP-208ENST00000639561 RNF169Q8NCN4 708 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 RTP4Q96DX8 246 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 NCAPGQ9BPX3 1015 aa14.34□□□□□ -0.11
ATRIP-208ENST00000639561 CCDC134Q9H6E4 229 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms