RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 UPP1Q16831 310 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 SLC26A11Q86WA9 606 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 SIGLEC10Q96LC7 697 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 PRDM16Q9HAZ2 1276 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 HAUS2Q9NVX0 235 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 SLC17A7Q9P2U7 560 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 CDH9Q9ULB4 789 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 MAD1L1Q9Y6D9 718 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 A0A0A0MRY4 1105 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 CXorf49A8MYA2 514 aaPredicted RBP22.22■■□□□ 1.15
CLN6-224ENST00000638076 F5H423 210 aaPredicted RBP22.22■■□□□ 1.15
CLN6-224ENST00000638076 FAM155BO75949 473 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 CD52P31358 61 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 MGAT5Q09328 741 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 AP1B1Q10567 949 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 TIGD5Q53EQ6 642 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 UNC5AQ6ZN44 842 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 CTU1Q7Z7A3 348 aaKnown RBP22.22■■□□□ 1.15
CLN6-224ENST00000638076 LRRC6Q86X45 466 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 MPP5Q8N3R9 675 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 SPATA13Q96N96 652 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 CNGB3Q9NQW8 809 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 PADI3Q9ULW8 664 aa22.22■■□□□ 1.15
CLN6-224ENST00000638076 TRDMT1O14717 391 aaKnown RBP22.21■■□□□ 1.15
CLN6-224ENST00000638076 SEPT4O43236 478 aa22.21■■□□□ 1.15
CLN6-224ENST00000638076 RASSF9O75901 435 aa22.21■■□□□ 1.15
CLN6-224ENST00000638076 USP17L7P0C7H9 530 aa22.21■■□□□ 1.15
CLN6-224ENST00000638076 PRKCHP24723 683 aa22.21■■□□□ 1.15
CLN6-224ENST00000638076 RPL9P32969 192 aaKnown RBP22.21■■□□□ 1.15
CLN6-224ENST00000638076 FLT3LGP49771 235 aa22.21■■□□□ 1.15
CLN6-224ENST00000638076 FCGRTP55899 365 aa22.21■■□□□ 1.15
CLN6-224ENST00000638076 RNF43Q68DV7 783 aa22.21■■□□□ 1.15
CLN6-224ENST00000638076 MRPL10Q7Z7H8 261 aaKnown RBP22.21■■□□□ 1.15
CLN6-224ENST00000638076 ZNF75CPQ92670 426 aaPredicted RBP22.21■■□□□ 1.15
CLN6-224ENST00000638076 THOC1Q96FV9 657 aaKnown RBP22.21■■□□□ 1.15
CLN6-224ENST00000638076 TRIM56Q9BRZ2 755 aaKnown RBP22.21■■□□□ 1.15
CLN6-224ENST00000638076 I3L4J1 428 aa22.2■■□□□ 1.15
CLN6-224ENST00000638076 EEF2KO00418 725 aaKnown RBP22.2■■□□□ 1.15
CLN6-224ENST00000638076 MGEA5O60502 916 aa22.2■■□□□ 1.15
CLN6-224ENST00000638076 LPXNO60711 386 aa22.2■■□□□ 1.15
CLN6-224ENST00000638076 EDF1O60869 148 aaKnown RBP22.2■■□□□ 1.15
CLN6-224ENST00000638076 APOEP02649 317 aa22.2■■□□□ 1.15
CLN6-224ENST00000638076 HNRNPH1P31943 449 aaKnown RBP22.2■■□□□ 1.15
CLN6-224ENST00000638076 RAB41Q5JT25 222 aa22.2■■□□□ 1.15
CLN6-224ENST00000638076 RPAINQ86UA6 219 aa22.2■■□□□ 1.15
CLN6-224ENST00000638076 FITM2Q8N6M3 262 aa22.2■■□□□ 1.15
CLN6-224ENST00000638076 COLGALT1Q8NBJ5 622 aa22.2■■□□□ 1.15
CLN6-224ENST00000638076 ZIC5Q96T25 663 aa22.2■■□□□ 1.15
CLN6-224ENST00000638076 EBNA1BP2Q99848 306 aaKnown RBP22.2■■□□□ 1.15
CLN6-224ENST00000638076 XAB2Q9HCS7 855 aaKnown RBP22.2■■□□□ 1.15
CLN6-224ENST00000638076 PTCH2Q9Y6C5 1203 aa22.2■■□□□ 1.15
CLN6-224ENST00000638076 WDR91A4D1P6 747 aa22.2■■□□□ 1.14
CLN6-224ENST00000638076 POMCP01189 267 aa22.2■■□□□ 1.14
CLN6-224ENST00000638076 ASGR1P07306 291 aa22.2■■□□□ 1.14
CLN6-224ENST00000638076 NCAM1P13591 858 aa22.2■■□□□ 1.14
CLN6-224ENST00000638076 ADRA1BP35368 520 aa22.2■■□□□ 1.14
CLN6-224ENST00000638076 PAN2Q504Q3 1202 aaKnown RBP22.2■■□□□ 1.14
CLN6-224ENST00000638076 TTC39BQ5VTQ0 682 aaPredicted RBP22.2■■□□□ 1.14
CLN6-224ENST00000638076 RFX8Q6ZV50 586 aa22.2■■□□□ 1.14
CLN6-224ENST00000638076 ECHDC2Q86YB7 292 aa22.2■■□□□ 1.14
CLN6-224ENST00000638076 GBP7Q8N8V2 638 aaPredicted RBP22.2■■□□□ 1.14
CLN6-224ENST00000638076 P2RY11Q96G91 374 aa22.2■■□□□ 1.14
CLN6-224ENST00000638076 RHOBTB2Q9BYZ6 727 aa22.2■■□□□ 1.14
CLN6-224ENST00000638076 RXFP1Q9HBX9 757 aa22.2■■□□□ 1.14
CLN6-224ENST00000638076 WDR6Q9NNW5 1121 aaKnown RBP22.2■■□□□ 1.14
CLN6-224ENST00000638076 FAM72CH0Y354 149 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 CA12O43570 354 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 ADAMTS4O75173 837 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 PYGBP11216 843 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 FDFT1P37268 417 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 DPYSQ14117 519 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 PRKD1Q15139 912 aaPredicted RBP22.19■■□□□ 1.14
CLN6-224ENST00000638076 GALNTL6Q49A17 601 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 FAM72AQ5TYM5 149 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 FAM72DQ6L9T8 149 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 SH2D5Q6ZV89 423 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 FAM72BQ86X60 149 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 CCNYQ8ND76 341 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 SMARCD1Q96GM5 515 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 SLC9A7Q96T83 725 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 CEP41Q9BYV8 373 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 ANLNQ9NQW6 1124 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 SMYD2Q9NRG4 433 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 TSC2P49815 1807 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 CEP350Q5VT06 3117 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 HHLA1C9JL84 531 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 RNF103O00237 685 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 HGSO14964 777 aaPredicted RBP22.19■■□□□ 1.14
CLN6-224ENST00000638076 GSTA2P09210 222 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 PCSK1P29120 753 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 SLC18A2Q05940 514 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 PDK1Q15118 436 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 ZNF276Q8N554 614 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 APOPT1Q96IL0 206 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 XPNPEP3Q9NQH7 507 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 SEPT10Q9P0V9 454 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 ZNF180Q9UJW8 692 aa22.19■■□□□ 1.14
CLN6-224ENST00000638076 SF3B1O75533 1304 aaKnown RBP eCLIP22.18■■□□□ 1.146e-9■■■■■ 118.2
CLN6-224ENST00000638076 C9IYK1 514 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 TRIM49D1C9J1S8 452 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms