RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 STXBP5LQ9Y2K9 1186 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 ASB3Q9Y575 518 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 SLC30A1Q9Y6M5 507 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 RNASEH1O60930 286 aaKnown RBP5.7□□□□□ -1.5
CHD2-227ENST00000637572 GPC4O75487 556 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 TRUB2O95900 331 aaKnown RBP5.7□□□□□ -1.5
CHD2-227ENST00000637572 GLUD1P00367 558 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 IRF1P10914 325 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 CES1P23141 567 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 CCND3P30281 292 aaPredicted RBP5.7□□□□□ -1.5
CHD2-227ENST00000637572 MIPP30301 263 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 SPRP35270 261 aaPredicted RBP5.7□□□□□ -1.5
CHD2-227ENST00000637572 PLA2G4AP47712 749 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 HADHBP55084 474 aaKnown RBP5.7□□□□□ -1.5
CHD2-227ENST00000637572 OTUD4Q01804 1114 aaKnown RBP5.7□□□□□ -1.5
CHD2-227ENST00000637572 FPGSQ05932 587 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 ELOAQ14241 798 aaKnown RBP5.7□□□□□ -1.5
CHD2-227ENST00000637572 CCDC6Q16204 474 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 PLEKHA7Q6IQ23 1121 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 RAB42Q8N4Z0 105 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 EMC1Q8N766 993 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 PPM1NQ8N819 430 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 LEMD2Q8NC56 503 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 MGARPQ8TDB4 240 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 SEMA4DQ92854 862 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 DCUN1D1Q96GG9 259 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 EIF2AQ9BY44 585 aaKnown RBP5.7□□□□□ -1.5
CHD2-227ENST00000637572 TSPAN10Q9H1Z9 355 aaPredicted RBP5.7□□□□□ -1.5
CHD2-227ENST00000637572 ATXN3LQ9H3M9 355 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 TRMT13Q9NUP7 481 aaKnown RBP5.7□□□□□ -1.5
CHD2-227ENST00000637572 FAM8A1Q9UBU6 413 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 TUBGCP4Q9UGJ1 667 aa5.7□□□□□ -1.5
CHD2-227ENST00000637572 E5RI56 91 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 PYGLP06737 847 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 MYL4P12829 197 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 HSPA9P38646 679 aaKnown RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 SPDYCQ5MJ68 293 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 ZNF618Q5T7W0 954 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 MAP3K21Q5TCX8 1036 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 FUT10Q6P4F1 479 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 SLC26A9Q7LBE3 791 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 DDX53Q86TM3 631 aaKnown RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.69□□□□□ -1.5
CHD2-227ENST00000637572 LNX1Q8TBB1 728 aaPredicted RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 DDI1Q8WTU0 396 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 ATP6V1E2Q96A05 226 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 C11orf84Q9BUA3 381 aaPredicted RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 ADGRE3Q9BY15 652 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 PRKD2Q9BZL6 878 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 TTYH3Q9C0H2 523 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 GDAP2Q9NXN4 497 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 GABRQQ9UN88 632 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 C2orf81A6NN90 581 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 KDM1AO60341 852 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 CNTFP26441 200 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 EIF1AXP47813 144 aaKnown RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 STX1BP61266 288 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 PTP4A2Q12974 167 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 GTF2H3Q13889 308 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 SLC25A52Q3SY17 297 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 MARC1Q5VT66 337 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 RASSF3Q86WH2 238 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 FAM71DQ8N9W8 422 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 ZSWIM2Q8NEG5 633 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 LENG1Q96BZ8 264 aaPredicted RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 LRRC39Q96DD0 335 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 SAMD11Q96NU1 681 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 TLR10Q9BXR5 811 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 UNC93B1Q9H1C4 597 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 LRRC40Q9H9A6 602 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 IGSF5Q9NSI5 407 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 PSMC3IPQ9P2W1 217 aaPredicted RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 PKP3Q9Y446 797 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 INSL6Q9Y581 213 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 DUSP10Q9Y6W6 482 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 MBLAC1A4D2B0 266 aaPredicted RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 SDR42E2A6NKP2 422 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 EPHB6O15197 1021 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 MTA2O94776 668 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 BAIAP3O94812 1187 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 SLC4A1P02730 911 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 USP17L7P0C7H9 530 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 RARGP13631 454 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 HOXB8P17481 243 aaPredicted RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 HADHAP40939 763 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 MAGEA4P43358 317 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 MNAT1P51948 309 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 ZNF200P98182 395 aaPredicted RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 FAM183BPQ6ZVS7 135 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 TBC1D1Q86TI0 1168 aaPredicted RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 WDR75Q8IWA0 830 aaKnown RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 CRYBG2Q8N1P7 616 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 ACTL9Q8TC94 416 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 MARVELD3Q96A59 401 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 TMA16Q96EY4 203 aaKnown RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 SLC9A7Q96T83 725 aa5.69□□□□□ -1.5
CHD2-227ENST00000637572 DMGDHQ9UI17 866 aaKnown RBP5.69□□□□□ -1.5
CHD2-227ENST00000637572 ASXL3Q9C0F0 2248 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 TMEM191CA6NGB0 347 aa5.68□□□□□ -1.5
CHD2-227ENST00000637572 F8VP50 259 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms