RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 KLHDC10Q6PID8 442 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 WDR59Q6PJI9 974 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 ARMCX6Q7L4S7 300 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 RABEPKQ7Z6M1 372 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 FRMD1Q8N878 549 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 C12orf29Q8N999 325 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 NEK11Q8NG66 645 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 CEP76Q8TAP6 659 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 ANKRD7Q92527 254 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 CHP1Q99653 195 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 TUBB2BQ9BVA1 445 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 NUCKS1Q9H1E3 243 aaKnown RBP13.23□□□□□ -0.29
CTSD-208ENST00000636843 PNPLA8Q9NP80 782 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.23□□□□□ -0.296e-7■■■■■ 69.6
CTSD-208ENST00000636843 FAM49BQ9NUQ9 324 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 TMEM74BQ9NUR3 256 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 DNAJC17Q9NVM6 304 aaKnown RBP13.23□□□□□ -0.29
CTSD-208ENST00000636843 MARK1Q9P0L2 795 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 HMGXB4Q9UGU5 601 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 PILRBQ9UKJ0 227 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.23□□□□□ -0.29
CTSD-208ENST00000636843 CEP295Q9C0D2 2601 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 SLC16A3O15427 465 aaKnown RBP13.23□□□□□ -0.29
CTSD-208ENST00000636843 ZNF217O75362 1048 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 URI1O94763 535 aaPredicted RBP13.23□□□□□ -0.29
CTSD-208ENST00000636843 IPO7O95373 1038 aaKnown RBP13.23□□□□□ -0.29
CTSD-208ENST00000636843 TBX18O95935 607 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 HOXB2P14652 356 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 TYRP14679 529 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 GABRG2P18507 467 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 INCA1Q0VD86 236 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 ORC1Q13415 861 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 DUOXA1Q1HG43 343 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 ACRBPQ8NEB7 543 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 BBS2Q9BXC9 721 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 IMPG2Q9BZV3 1241 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 DNAI2Q9GZS0 605 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 SLC32A1Q9H598 525 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 HAUS4Q9H6D7 363 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 MMRN2Q9H8L6 949 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 CYP3A43Q9HB55 503 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 METTL14Q9HCE5 456 aaKnown RBP13.23□□□□□ -0.29
CTSD-208ENST00000636843 LZTFL1Q9NQ48 299 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 WASF3Q9UPY6 502 aa13.23□□□□□ -0.29
CTSD-208ENST00000636843 A0A1W2PQF6 199 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 UPK3BL1B0FP48 263 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 EIF3CLB5ME19 914 aaKnown RBP13.22□□□□□ -0.29
CTSD-208ENST00000636843 HHLA1C9JL84 531 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 UPK3BL2E5RIL1 263 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 NEDD8-MDP1E9PL57 170 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 TRIM24O15164 1050 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 RRP9O43818 475 aaKnown RBP13.22□□□□□ -0.29
CTSD-208ENST00000636843 ENGP17813 658 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 ACO1P21399 889 aaKnown RBP13.22□□□□□ -0.29
CTSD-208ENST00000636843 ITPKAP23677 461 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 ADORA2BP29275 332 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 PLA2G4AP47712 749 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 VAMP7P51809 220 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 RPL6Q02878 288 aaKnown RBP13.22□□□□□ -0.29
CTSD-208ENST00000636843 ENPEPQ07075 957 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 FOXC1Q12948 553 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 C1orf220Q5T0J3 134 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 EGFLAMQ63HQ2 1017 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 SPOPLQ6IQ16 392 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 CLEC20AQ6ZU45 233 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 ZNF276Q8N554 614 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 CYFIP2Q96F07 1278 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 WDR24Q96S15 920 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 EIF3CQ99613 913 aaKnown RBP13.22□□□□□ -0.29
CTSD-208ENST00000636843 NT5C1AQ9BXI3 368 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 OSER1Q9NX31 292 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 CALCOCO1Q9P1Z2 691 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 DNMT3LQ9UJW3 386 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 HCN2Q9UL51 889 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 SLC6A14Q9UN76 642 aa13.22□□□□□ -0.29
CTSD-208ENST00000636843 ASCC3Q8N3C0 2202 aaKnown RBP13.21□□□□□ -0.29
CTSD-208ENST00000636843 GFRA2O00451 464 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 CYP26A1O43174 497 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 CFIP05156 583 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 SERPINF2P08697 491 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 EPB41P11171 864 aaKnown RBP13.21□□□□□ -0.29
CTSD-208ENST00000636843 RARGP13631 454 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 WASP42768 502 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 MAPK8P45983 427 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 PSEN1P49768 467 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 KIF11P52732 1056 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 ATXN3P54252 364 aaPredicted RBP13.21□□□□□ -0.29
CTSD-208ENST00000636843 C10orf120Q5SQS8 335 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 UNQ6494/PRO21346Q6UXR6 183 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 TPGS1Q6ZTW0 290 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 INTS8Q75QN2 995 aaKnown RBP13.21□□□□□ -0.29
CTSD-208ENST00000636843 GPRIN1Q7Z2K8 1008 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 TADA2BQ86TJ2 420 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 MIB1Q86YT6 1006 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 CHPFQ8IZ52 775 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 DEFB124Q8NES8 71 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 IPO4Q8TEX9 1081 aaKnown RBP13.21□□□□□ -0.29
CTSD-208ENST00000636843 TSC1Q92574 1164 aa13.21□□□□□ -0.29
CTSD-208ENST00000636843 SYN2Q92777 582 aaPredicted RBP13.21□□□□□ -0.29
CTSD-208ENST00000636843 GABRG3Q99928 467 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms