RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 CLEC4CQ8WTT0 213 aa19.18■□□□□ 0.66
CLN6-214ENST00000636314 SHC3Q92529 594 aa19.18■□□□□ 0.66
CLN6-214ENST00000636314 ADAM33Q9BZ11 813 aa19.18■□□□□ 0.66
CLN6-214ENST00000636314 POLMQ9NP87 494 aaPredicted RBP19.18■□□□□ 0.66
CLN6-214ENST00000636314 ASCC3Q8N3C0 2202 aaKnown RBP19.18■□□□□ 0.66
CLN6-214ENST00000636314 ZZEF1O43149 2961 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 BECN2A8MW95 431 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 KCNJ18B7U540 433 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 CDX4O14627 284 aaPredicted RBP19.17■□□□□ 0.66
CLN6-214ENST00000636314 SART1O43290 800 aaKnown RBP19.17■□□□□ 0.66
CLN6-214ENST00000636314 MSI1O43347 362 aaKnown RBP19.17■□□□□ 0.66
CLN6-214ENST00000636314 TOP3BO95985 862 aaKnown RBP19.17■□□□□ 0.66
CLN6-214ENST00000636314 PENKP01210 267 aaPredicted RBP19.17■□□□□ 0.66
CLN6-214ENST00000636314 CEACAM1P13688 526 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 CSRP1P21291 193 aaKnown RBP19.17■□□□□ 0.66
CLN6-214ENST00000636314 ACADSBP45954 432 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 IRX4P78413 519 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 KCNJ12Q14500 433 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 TMEM92Q6UXU6 159 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 TOGARAM2Q6ZUX3 1019 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 CPXM2Q8N436 756 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 DEFB124Q8NES8 71 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 ZNF606Q8WXB4 792 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 SIX2Q9NPC8 291 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 ACP6Q9NPH0 428 aa19.17■□□□□ 0.66
CLN6-214ENST00000636314 ASPMQ8IZT6 3477 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 AKAP13Q12802 2813 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 MAP3K13O43283 966 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 HNRNPLP14866 589 aaKnown RBP eCLIP19.16■□□□□ 0.66
CLN6-214ENST00000636314 MIIPQ5JXC2 388 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 FYB2Q5VWT5 728 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 EGFLAMQ63HQ2 1017 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 ARMCX6Q7L4S7 300 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 FAM217AQ8IXS0 508 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 STK32AQ8WU08 396 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 RLN3Q8WXF3 142 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 FAM149B1Q96BN6 582 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 SPACA7Q96KW9 195 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 SAMSN1Q9NSI8 373 aaKnown RBP19.16■□□□□ 0.66
CLN6-214ENST00000636314 BCCIPQ9P287 314 aaKnown RBP eCLIP19.16■□□□□ 0.66
CLN6-214ENST00000636314 DNAJC12Q9UKB3 198 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 STARD13Q9Y3M8 1113 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 NFE2L3Q9Y4A8 694 aa19.16■□□□□ 0.66
CLN6-214ENST00000636314 TCRBV21S2A2A0A5A6 115 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 ADAM23O75077 832 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 LATS1O95835 1130 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 HOXB2P14652 356 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 EEF1GP26641 437 aaKnown RBP19.15■□□□□ 0.66
CLN6-214ENST00000636314 RPL34P49207 117 aaKnown RBP19.15■□□□□ 0.66
CLN6-214ENST00000636314 TRIM61Q5EBN2 209 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 KIAA1211LQ6NV74 962 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 RBM43Q6ZSC3 357 aaKnown RBP19.15■□□□□ 0.66
CLN6-214ENST00000636314 LPCAT2Q7L5N7 544 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 SCUBE3Q8IX30 993 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 CHPFQ8IZ52 775 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 KDF1Q8NAX2 398 aaPredicted RBP19.15■□□□□ 0.66
CLN6-214ENST00000636314 DDI1Q8WTU0 396 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 P2RY11Q96G91 374 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 TRIM62Q9BVG3 475 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 SCNM1Q9BWG6 230 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 NUSAP1Q9BXS6 441 aaKnown RBP19.15■□□□□ 0.66
CLN6-214ENST00000636314 AJAP1Q9UKB5 411 aaPredicted RBP19.15■□□□□ 0.66
CLN6-214ENST00000636314 WASF3Q9UPY6 502 aa19.15■□□□□ 0.66
CLN6-214ENST00000636314 SPEGQ15772 3267 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 PRRT4C9JH25 899 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 E5RJQ4 531 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 CISD3P0C7P0 127 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 NCAM1P13591 858 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 NTSR1P30989 418 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 MAPK8P45983 427 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 ZNF445P59923 1031 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 PTK2Q05397 1052 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 LMAN2Q12907 356 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 PDCLQ13371 301 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 TCP11X2Q5H9J9 407 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 NUGGCQ68CJ6 796 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 SMYD5Q6GMV2 418 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 SDE2Q6IQ49 451 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 TMEFF1Q8IYR6 380 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 PGBD3Q8N328 593 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 OLIG1Q8TAK6 271 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 ENOX1Q8TC92 643 aaKnown RBP19.14■□□□□ 0.65
CLN6-214ENST00000636314 HMGB4Q8WW32 186 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 SLC4A5Q9BY07 1137 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 EVLQ9UI08 416 aaPredicted RBP19.14■□□□□ 0.65
CLN6-214ENST00000636314 CYTH4Q9UIA0 394 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 FBXO10Q9UK96 956 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 SLC27A6Q9Y2P4 619 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 IGF2RP11717 2491 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 WDFY3Q8IZQ1 3526 aa19.14■□□□□ 0.65
CLN6-214ENST00000636314 TMEM8BA6NDV4 472 aa19.13■□□□□ 0.65
CLN6-214ENST00000636314 MBD3O95983 291 aa19.13■□□□□ 0.65
CLN6-214ENST00000636314 IGLV3-27P01718 113 aa19.13■□□□□ 0.65
CLN6-214ENST00000636314 P2RY2P41231 377 aa19.13■□□□□ 0.65
CLN6-214ENST00000636314 WASP42768 502 aa19.13■□□□□ 0.65
CLN6-214ENST00000636314 TBX4P57082 545 aa19.13■□□□□ 0.65
CLN6-214ENST00000636314 MPPE1Q53F39 396 aa19.13■□□□□ 0.65
CLN6-214ENST00000636314 SASS6Q6UVJ0 657 aa19.13■□□□□ 0.65
CLN6-214ENST00000636314 PASD1Q8IV76 773 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms