RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 STK39Q9UEW8 545 aa15.26■□□□□ 0.03
CACNA1A-220ENST00000635988 HEY1Q9Y5J3 304 aa15.26■□□□□ 0.03
CACNA1A-220ENST00000635988 MAFBQ9Y5Q3 323 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-220ENST00000635988 GCATO75600 419 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 ABCE1P61221 599 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 MTMR2Q13614 643 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 PCLAFQ15004 111 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 SLC9A4Q6AI14 798 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 STYK1Q6J9G0 422 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 C16orf46Q6P387 395 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 FRMD7Q6ZUT3 714 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 CYP4V2Q6ZWL3 525 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 MAVSQ7Z434 540 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 USP6NLQ92738 828 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 ANKRD36BP1Q96IX9 119 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 LRGUKQ96M69 825 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 CATSPER2Q96P56 530 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 SORT1Q99523 831 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 MMP19Q99542 508 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 TMEM39BQ9GZU3 492 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 PNPOQ9NVS9 261 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 CDY2AQ9Y6F7 541 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 CDY1Q9Y6F8 540 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 DNAJA2O60884 412 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 ALDH1A2O94788 518 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 IMPDH2P12268 514 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 MX2P20592 715 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 CYLC2Q14093 348 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 STEAP4Q687X5 459 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 BORAQ6PGQ7 559 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 KLHDC10Q6PID8 442 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 ZNF534Q76KX8 674 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 KLHL23Q8NBE8 558 aa15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 GFM2Q969S9 779 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 NIFKQ9BYG3 293 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 NXF1Q9UBU9 619 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-220ENST00000635988 LOC100653049A0A140TA62 436 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 SPATA31C2B4DYI2 1134 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 ZNF195O14628 629 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 LGR5O75473 907 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 KRT34O76011 436 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 RGS20O76081 388 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 SORBS2O94875 1100 aaKnown RBP15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 RALBP11234 206 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 PDGFRAP16234 1089 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 CAPSQ13938 189 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 PDE1CQ14123 709 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 ZNF667Q5HYK9 610 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 C16orf89Q6UX73 402 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 ZBTB33Q86T24 672 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 RSPH3Q86UC2 560 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 ADCY4Q8NFM4 1077 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 TBCBQ99426 244 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 BCO2Q9BYV7 579 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 CPSF3Q9UKF6 684 aaKnown RBP15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 PADI4Q9UM07 663 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 CCDC160A6NGH7 325 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 C2CD4BA6NLJ0 364 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 ZNF487B1APH4 448 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 TPP1O14773 563 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 PFDN1O60925 122 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 MICAL2O94851 1124 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 TOP3BO95985 862 aaKnown RBP15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 HMGCRP04035 888 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 ALDOAP04075 364 aaKnown RBP15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 HDAC4P56524 1084 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 HPCAP84074 193 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 PTPN11Q06124 597 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 NADK2Q4G0N4 442 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 RSBN1LQ6PCB5 846 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 C10orf107Q8IVU9 208 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 RBM12BQ8IXT5 1001 aaKnown RBP15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 PQLC3Q8N755 202 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 RXFP2Q8WXD0 754 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 PPP1R14BQ96C90 147 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 RBM38Q9H0Z9 239 aaKnown RBP15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 HSFX1Q9UBD0 423 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 COPG2Q9UBF2 871 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 TELO2Q9Y4R8 837 aa15.24■□□□□ 0.03
CACNA1A-220ENST00000635988 DCXO43602 365 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 ITGBL1O95965 494 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 THRAP10827 490 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 MLNP12872 115 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 DESP17661 470 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 IL4RP24394 825 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 INHBCP55103 352 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 KLF10Q13118 480 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 USP41Q3LFD5 358 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 CCDC153Q494R4 210 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 PACS1Q6VY07 963 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 ZNF670Q9BS34 389 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 SHCBP1LQ9BZQ2 653 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 XPNPEP3Q9NQH7 507 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 DNAAF2Q9NVR5 837 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 TTC36A6NLP5 189 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 YDJCA8MPS7 323 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 HNRNPRO43390 633 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 B4GALT4O60513 344 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 FBXO21O94952 628 aa15.23■□□□□ 0.03
CACNA1A-220ENST00000635988 CRTAMO95727 393 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms