RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 DTWD2Q8NBA8 298 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 OR8K1Q8NGG5 319 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 EZH1Q92800 747 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-210ENST00000635675 EXOC4Q96A65 974 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 VCPIP1Q96JH7 1222 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 DNAJC7Q99615 494 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 BBS2Q9BXC9 721 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 FAM204AQ9H8W3 233 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 RBM12Q9NTZ6 932 aaKnown RBP10.12□□□□□ -0.79
LINC00339-210ENST00000635675 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.12□□□□□ -0.792e-6■■□□□ 13.8
LINC00339-210ENST00000635675 DDIT4Q9NX09 232 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 GOLGA6L7A0A1B0GV03 622 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 C2CD4BA6NLJ0 364 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 SIGLEC16A6NMB1 481 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 TMCO5BA8MYB1 307 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 NEDD8-MDP1E9PL57 170 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 M0QYT0 321 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 CACNG3O60359 315 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 RTN2O75298 545 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 TULP3O75386 442 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 GJB6O95452 261 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 EGFP01133 1207 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 FTLP02792 175 aaPredicted RBP10.11□□□□□ -0.79
LINC00339-210ENST00000635675 SLC2A3P11169 496 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 KRT3P12035 628 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 RFC1P35251 1148 aaPredicted RBP10.11□□□□□ -0.79
LINC00339-210ENST00000635675 ZNF75DP51815 510 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 LRRC32Q14392 662 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 PPP2R5DQ14738 602 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 FAM133BQ5BKY9 247 aaKnown RBP10.11□□□□□ -0.79
LINC00339-210ENST00000635675 NADSYN1Q6IA69 706 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 MAMSTRQ6ZN01 415 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 BNIPLQ7Z465 357 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 EMC1Q8N766 993 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 NAT16Q8N8M0 369 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 C3orf20Q8ND61 904 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 JOSD2Q8TAC2 188 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 PGAP3Q96FM1 320 aaPredicted RBP10.11□□□□□ -0.79
LINC00339-210ENST00000635675 MRFAP1L1Q96HT8 127 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 BTN2A3PQ96KV6 586 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 PNKPQ96T60 521 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 IRX2Q9BZI1 471 aaPredicted RBP10.11□□□□□ -0.79
LINC00339-210ENST00000635675 ISCUQ9H1K1 167 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 CHRDQ9H2X0 955 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 METTL5Q9NRN9 209 aaKnown RBP10.11□□□□□ -0.79
LINC00339-210ENST00000635675 PIGVQ9NUD9 493 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 ARHGAP20Q9P2F6 1191 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 ADAMTS1Q9UHI8 967 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 FBXO10Q9UK96 956 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 STAP1Q9ULZ2 295 aa10.11□□□□□ -0.79
LINC00339-210ENST00000635675 SYNJ2BP-COX16A0A087WUM0 186 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 A0A087X0T9 212 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.1□□□□□ -0.79
LINC00339-210ENST00000635675 K7EQS6 105 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 TRIM24O15164 1050 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 ENDOD1O94919 500 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 KAT7O95251 611 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 F9P00740 461 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 APOEP02649 317 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 CISD3P0C7P0 127 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 FAM228BP0C875 321 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 RRM1P23921 792 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 SLC6A4P31645 630 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 CCR1P32246 355 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 GRIA2P42262 883 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 CXCR3P49682 368 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 SULT1E1P49888 294 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 ADKP55263 362 aaKnown RBP10.1□□□□□ -0.79
LINC00339-210ENST00000635675 NME3Q13232 169 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 GAS6Q14393 721 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 FBXO43Q4G163 708 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 MPPE1Q53F39 396 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 TDRD12Q587J7 1177 aaKnown RBP10.1□□□□□ -0.79
LINC00339-210ENST00000635675 PPP1R15BQ5SWA1 713 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 PIK3R6Q5UE93 754 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 RFWD3Q6PCD5 774 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 TMC6Q7Z403 805 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 VPS36Q86VN1 386 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 DNAAF5Q86Y56 855 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 RXFP2Q8WXD0 754 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 ANP32BQ92688 251 aaKnown RBP10.1□□□□□ -0.79
LINC00339-210ENST00000635675 BHMTQ93088 406 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 TMA16Q96EY4 203 aaKnown RBP10.1□□□□□ -0.79
LINC00339-210ENST00000635675 CFAP57Q96MR6 1250 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 XPO6Q96QU8 1125 aaKnown RBP10.1□□□□□ -0.79
LINC00339-210ENST00000635675 TBCBQ99426 244 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC00339-210ENST00000635675 TMEM51Q9NW97 253 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 PLK2Q9NYY3 685 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 COX16Q9P0S2 106 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 DEC1Q9P2X7 70 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 XPO7Q9UIA9 1087 aaKnown RBP10.1□□□□□ -0.79
LINC00339-210ENST00000635675 KIAA1549LQ6ZVL6 1849 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 CACNA1IQ9P0X4 2223 aa10.1□□□□□ -0.79
LINC00339-210ENST00000635675 GALR2O43603 387 aaPredicted RBP10.09□□□□□ -0.79
LINC00339-210ENST00000635675 TSPAN3O60637 253 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 MFAP3LO75121 409 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 MOCS2O96007 188 aaPredicted RBP10.09□□□□□ -0.79
LINC00339-210ENST00000635675 CYBBP04839 570 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 TPM1P09493 284 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms