RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 FAM131BQ86XD5 332 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 ZNF280BQ86YH2 543 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 ANKMY2Q8IV38 441 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 IGDCC3Q8IVU1 814 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 DCP1BQ8IZD4 617 aaKnown RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 PYROXD2Q8N2H3 581 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 FBXO36Q8NEA4 188 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 OR10T2Q8NGX3 314 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 SLC7A14Q8TBB6 771 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 DENND1AQ8TEH3 1009 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 RNF139Q8WU17 664 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 CKAP2Q8WWK9 683 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 HTR3CQ8WXA8 447 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 LINC01599Q8WXQ3 324 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 CHMP6Q96FZ7 201 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 FUBP3Q96I24 572 aaKnown RBP eCLIP5.75□□□□□ -1.49
NEK3-211ENST00000629912 SIGLEC10Q96LC7 697 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 C8orf48Q96LL4 319 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 HAPLN3Q96S86 360 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 CYTH2Q99418 400 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 SELENOSQ9BQE4 189 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 FERMT1Q9BQL6 677 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 COLEC11Q9BWP8 271 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 OXCT2Q9BYC2 517 aaPredicted RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 ZCWPW1Q9H0M4 648 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 ACSS3Q9H6R3 686 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 WDCPQ9H6R7 721 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 VPS37BQ9H9H4 285 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 XAB2Q9HCS7 855 aaKnown RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 STARD7Q9NQZ5 370 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 EIF2B3Q9NR50 452 aaKnown RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 ABCC13Q9NSE7 274 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 PIGVQ9NUD9 493 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 TMLHEQ9NVH6 421 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 COMMD8Q9NX08 183 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 IL37Q9NZH6 218 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 PSMC3IPQ9P2W1 217 aaPredicted RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 RSPH14Q9UHP6 348 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 INPP5FQ9Y2H2 1132 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 MYO18AQ92614 2054 aaKnown RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 ATXN2Q99700 1313 aaKnown RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 TTC3P53804 2025 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 A0A0A0MRY4 1105 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 TMEM120BA0PK00 339 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 FAM47DPA6NHR8 397 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 OR6C75A6NL08 312 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 RASA4BC9J798 803 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 KBTBD13C9JR72 458 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 POC1B-GALNT4F8VUJ3 575 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 I6L893 689 aaPredicted RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 EEF2KO00418 725 aaKnown RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 DNM1LO00429 736 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 PITPNM1O00562 1244 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 PPP1R12AO14974 1030 aaPredicted RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 MTSS1O43312 755 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 RASA4O43374 803 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 OPHN1O60890 802 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 STK10O94804 968 aaKnown RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 PARNO95453 639 aaKnown RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 C1QAP02745 245 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 ALDH2P05091 517 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 ITGB1P05556 798 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 NCAM1P13591 858 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 CREB1P16220 341 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 ERCC2P18074 760 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 MX2P20592 715 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 PRKCHP24723 683 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 SSTR1P30872 391 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 ELK3P41970 407 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 MSH2P43246 934 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 MAGEA11P43364 429 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 NRLP54845 237 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 NRG1Q02297 640 aaPredicted RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 SMARCB1Q12824 385 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 NME3Q13232 169 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 PPP2R5DQ14738 602 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 PKN2Q16513 984 aaKnown RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 NFE2Q16621 373 aaPredicted RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 BRMS1LQ5PSV4 323 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 HP1BP3Q5SSJ5 553 aaPredicted RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 HEATR6Q6AI08 1181 aaKnown RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 LRRC8BQ6P9F7 803 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 RGS9BPQ6ZS82 235 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 RFX8Q6ZV50 586 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 LRRC8DQ7L1W4 858 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 CPLX4Q7Z7G2 160 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 MON1AQ86VX9 555 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 SPATA2LQ8IUW3 424 aaPredicted RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 CCNJLQ8IV13 435 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 FAM126BQ8IXS8 530 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 VPS52Q8N1B4 723 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 CRIPAKQ8N1N5 446 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 COLGALT1Q8NBJ5 622 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 CCDC110Q8TBZ0 833 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 FBF1Q8TES7 1133 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 MZB1Q8WU39 189 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 DCAKDQ8WVC6 231 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 SLC44A1Q8WWI5 657 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 APBB2Q92870 758 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 ALKBH8Q96BT7 664 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms