RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 UCMAQ8WVF2 138 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 TMA16Q96EY4 203 aaKnown RBP23.26■■□□□ 1.31
SF1-220ENST00000626028 SLC39A13Q96H72 371 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 CPXM1Q96SM3 734 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 PLK2Q9NYY3 685 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 NAALADL1Q9UQQ1 740 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 SDK1Q7Z5N4 2213 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 LGALS16A8MUM7 142 aa23.25■■□□□ 1.31
SF1-220ENST00000626028 PRRT4C9JH25 899 aa23.25■■□□□ 1.31
SF1-220ENST00000626028 IGLV3-25P01717 112 aa23.25■■□□□ 1.31
SF1-220ENST00000626028 CDK11BP21127 795 aaKnown RBP23.25■■□□□ 1.31
SF1-220ENST00000626028 PXNP49023 591 aaPredicted RBP23.25■■□□□ 1.31
SF1-220ENST00000626028 COPB1P53618 953 aaKnown RBP23.25■■□□□ 1.31
SF1-220ENST00000626028 NCAPHQ15003 741 aa23.25■■□□□ 1.31
SF1-220ENST00000626028 RNF43Q68DV7 783 aa23.25■■□□□ 1.31
SF1-220ENST00000626028 TMEM92Q6UXU6 159 aa23.25■■□□□ 1.31
SF1-220ENST00000626028 ABCA7Q8IZY2 2146 aa23.25■■□□□ 1.31
SF1-220ENST00000626028 BHMTQ93088 406 aa23.25■■□□□ 1.31
SF1-220ENST00000626028 PIWIL1Q96J94 861 aaKnown RBP23.25■■□□□ 1.31
SF1-220ENST00000626028 GANQ9H2C0 597 aa23.25■■□□□ 1.31
SF1-220ENST00000626028 TRIM24O15164 1050 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 ACSL4O60488 711 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 SLC2A3P11169 496 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 PTMSP20962 102 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 HOXD9P28356 352 aaPredicted RBP23.24■■□□□ 1.31
SF1-220ENST00000626028 SCNN1AP37088 669 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 SRSF5Q13243 272 aaKnown RBP23.24■■□□□ 1.31
SF1-220ENST00000626028 BYSLQ13895 437 aaKnown RBP23.24■■□□□ 1.31
SF1-220ENST00000626028 SLC26A9Q7LBE3 791 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 ANKS1BQ7Z6G8 1248 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 PASD1Q8IV76 773 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 FCRL2Q96LA5 508 aaPredicted RBP23.24■■□□□ 1.31
SF1-220ENST00000626028 SLC2A13Q96QE2 648 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 GABRG3Q99928 467 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 PDCL3Q9H2J4 239 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 POLR3BQ9NW08 1133 aaPredicted RBP23.24■■□□□ 1.31
SF1-220ENST00000626028 RRN3Q9NYV6 651 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 SIK3Q9Y2K2 1263 aa23.24■■□□□ 1.31
SF1-220ENST00000626028 ZBTB24O43167 697 aaPredicted RBP23.23■■□□□ 1.31
SF1-220ENST00000626028 PNMA6AP0CW24 399 aaPredicted RBP23.23■■□□□ 1.31
SF1-220ENST00000626028 HOXC13P31276 330 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 EIF4EBP2Q13542 120 aaPredicted RBP23.23■■□□□ 1.31
SF1-220ENST00000626028 SYPL2Q5VXT5 272 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 ANO7Q6IWH7 933 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 OLFML1Q6UWY5 402 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 CHPFQ8IZ52 775 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 FAM160A2Q8N612 972 aaPredicted RBP23.23■■□□□ 1.31
SF1-220ENST00000626028 MSANTD4Q8NCY6 345 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 ZNF397Q8NF99 534 aaPredicted RBP23.23■■□□□ 1.31
SF1-220ENST00000626028 MDGA1Q8NFP4 955 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 OLIG1Q8TAK6 271 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 WFIKKN2Q8TEU8 576 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 DDX1Q92499 740 aaKnown RBP23.23■■□□□ 1.31
SF1-220ENST00000626028 P2RY11Q96G91 374 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 ERGIC2Q96RQ1 377 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 SYNCQ9H7C4 482 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 HCN2Q9UL51 889 aa23.23■■□□□ 1.31
SF1-220ENST00000626028 TYW5A2RUC4 315 aaKnown RBP23.22■■□□□ 1.31
SF1-220ENST00000626028 ANTXRLA6NF34 631 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 SMTNL1A8MU46 457 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 RHOBTB1O94844 696 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 TRUB2O95900 331 aaKnown RBP23.22■■□□□ 1.31
SF1-220ENST00000626028 APOEP02649 317 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 HOXB2P14652 356 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 GBP1P32455 592 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 GABRB2P47870 512 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 CDK17Q00537 523 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 SLC6A3Q01959 620 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 ENPP2Q13822 863 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 ELF2Q15723 593 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 KLHL40Q2TBA0 621 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 DCAF6Q58WW2 860 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 FAM133BQ5BKY9 247 aaKnown RBP23.22■■□□□ 1.31
SF1-220ENST00000626028 PIK3R6Q5UE93 754 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 EGFLAMQ63HQ2 1017 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 CAVIN1Q6NZI2 390 aaKnown RBP23.22■■□□□ 1.31
SF1-220ENST00000626028 TAC4Q86UU9 113 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 DCLK2Q8N568 766 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 EPS8L1Q8TE68 723 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 BTN2A3PQ96KV6 586 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 HSD3B7Q9H2F3 369 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 FAM207AQ9NSI2 230 aaPredicted RBP23.22■■□□□ 1.31
SF1-220ENST00000626028 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.22■■□□□ 1.31
SF1-220ENST00000626028 PCDHGA5Q9Y5G8 931 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 CEP250Q9BV73 2442 aa23.22■■□□□ 1.31
SF1-220ENST00000626028 JAM2P57087 298 aa23.21■■□□□ 1.31
SF1-220ENST00000626028 POLR2FP61218 127 aaKnown RBP23.21■■□□□ 1.31
SF1-220ENST00000626028 GEN1Q17RS7 908 aa23.21■■□□□ 1.31
SF1-220ENST00000626028 PTPN20Q4JDL3 420 aa23.21■■□□□ 1.31
SF1-220ENST00000626028 ANO6Q4KMQ2 910 aa23.21■■□□□ 1.31
SF1-220ENST00000626028 KIAA0907Q7Z7F0 614 aaPredicted RBP23.21■■□□□ 1.31
SF1-220ENST00000626028 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.21■■□□□ 1.31
SF1-220ENST00000626028 HJURPQ8NCD3 748 aaPredicted RBP23.21■■□□□ 1.31
SF1-220ENST00000626028 NEK11Q8NG66 645 aa23.21■■□□□ 1.31
SF1-220ENST00000626028 ELOVL2Q9NXB9 296 aa23.21■■□□□ 1.31
SF1-220ENST00000626028 THAP10Q9P2Z0 257 aaPredicted RBP23.21■■□□□ 1.31
SF1-220ENST00000626028 SLC12A6Q9UHW9 1150 aa23.21■■□□□ 1.31
SF1-220ENST00000626028 TNRC6BQ9UPQ9 1833 aaKnown RBP23.2■■□□□ 1.3
SF1-220ENST00000626028 A0A1W2PQF6 199 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 ERBB2P04626 1255 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms