RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 FAM118BQ9BPY3 351 aa3.87□□□□□ -1.79
VBP1-204ENST00000625964 ELAC2Q9BQ52 826 aaKnown RBP3.87□□□□□ -1.79
VBP1-204ENST00000625964 NLRC4Q9NPP4 1024 aa3.87□□□□□ -1.79
VBP1-204ENST00000625964 GAR1Q9NY12 217 aaKnown RBP3.87□□□□□ -1.79
VBP1-204ENST00000625964 MAFFQ9ULX9 164 aa3.87□□□□□ -1.79
VBP1-204ENST00000625964 SCAF8Q9UPN6 1271 aaKnown RBP3.87□□□□□ -1.79
VBP1-204ENST00000625964 CD8B2A6NJW9 211 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 ATF7P17544 494 aaPredicted RBP3.86□□□□□ -1.79
VBP1-204ENST00000625964 GSTM5P46439 218 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 JAK3P52333 1124 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 NANOS2P60321 138 aaKnown RBP3.86□□□□□ -1.79
VBP1-204ENST00000625964 KCNJ12Q14500 433 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 KPNB1Q14974 876 aaKnown RBP3.86□□□□□ -1.79
VBP1-204ENST00000625964 SEC23BQ15437 767 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 PFKFB3Q16875 520 aaPredicted RBP3.86□□□□□ -1.79
VBP1-204ENST00000625964 SYCP2LQ5T4T6 812 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 XRRA1Q6P2D8 792 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 C9orf47Q6ZRZ4 202 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 C18orf65Q6ZTR6 163 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 NOL8Q76FK4 1167 aaKnown RBP3.86□□□□□ -1.79
VBP1-204ENST00000625964 RASGRP3Q8IV61 690 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 IPO4Q8TEX9 1081 aaKnown RBP3.86□□□□□ -1.79
VBP1-204ENST00000625964 GJA10Q969M2 543 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 MUL1Q969V5 352 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 COQ8BQ96D53 544 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 C18orf8Q96DM3 657 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 KAZALD1Q96I82 304 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 CTAGE1Q96RT6 745 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 CHST12Q9NRB3 414 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 TXLNGQ9NUQ3 528 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 SLC39A10Q9ULF5 831 aa3.86□□□□□ -1.79
VBP1-204ENST00000625964 OR2W5A6NFC9 320 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 J3KTA2 159 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 HNRNPDLO14979 420 aaKnown RBP3.85□□□□□ -1.79
VBP1-204ENST00000625964 MBPP02686 304 aaPredicted RBP3.85□□□□□ -1.79
VBP1-204ENST00000625964 SLC3A2P08195 630 aaKnown RBP3.85□□□□□ -1.79
VBP1-204ENST00000625964 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 SEMA3BQ13214 749 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 RAB30Q15771 203 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 CNGA3Q16281 694 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 FAM90A2PQ658T7 463 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 TLDC1Q6P9B6 456 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 KRT27Q7Z3Y8 459 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 TTC30AQ86WT1 665 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 CLASRPQ8N2M8 674 aaKnown RBP3.85□□□□□ -1.79
VBP1-204ENST00000625964 SVIPQ8NHG7 77 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 MAP4K1Q92918 833 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 STK33Q9BYT3 514 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 NECTIN3Q9NQS3 549 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 ABHD10Q9NUJ1 306 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 ARL8BQ9NVJ2 186 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 PROCRQ9UNN8 238 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 PLA2G6O60733 806 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 ALADP13716 330 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 ATP5F1P24539 256 aaPredicted RBP3.85□□□□□ -1.79
VBP1-204ENST00000625964 IGHMBP2P38935 993 aaKnown RBP3.85□□□□□ -1.79
VBP1-204ENST00000625964 YPEL5P62699 121 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 GHRHRQ02643 423 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 BTKQ06187 659 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 STARD3Q14849 445 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 DGKKQ5KSL6 1271 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 ARL6IP4Q66PJ3 421 aaKnown RBP3.85□□□□□ -1.79
VBP1-204ENST00000625964 CCDC144NLQ6NUI1 221 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 SHC4Q6S5L8 630 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 PIK3AP1Q6ZUJ8 805 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 SYTL1Q8IYJ3 562 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 ZNF398Q8TD17 642 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 OVCA2Q8WZ82 227 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 CUL5Q93034 780 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 NUDT22Q9BRQ3 303 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 NUAK2Q9H093 628 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 HIPK2Q9H2X6 1198 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 EPS8L2Q9H6S3 715 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 TMEM8AQ9HCN3 771 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 ARFGAP3Q9NP61 516 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 TM7SF3Q9NS93 570 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 CDC23Q9UJX2 597 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 ICKQ9UPZ9 632 aa3.85□□□□□ -1.79
VBP1-204ENST00000625964 LY6G6EA0A0G2JKS1 128 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 FCHO1O14526 889 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 PIP5K1BO14986 540 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 MATN1P21941 496 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 MMP8P22894 467 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 TACR3P29371 465 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 PPM1AP35813 382 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 TECP42680 631 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 VPS41P49754 854 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 HDAC1Q13547 482 aaPredicted RBP3.84□□□□□ -1.8
VBP1-204ENST00000625964 CSHL1Q14406 222 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 ELF2Q15723 593 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 MEX3CQ5U5Q3 659 aaKnown RBP3.84□□□□□ -1.8
VBP1-204ENST00000625964 ANO7Q6IWH7 933 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 SKAP1Q86WV1 359 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 ADHFE1Q8IWW8 467 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 AKAP1Q92667 903 aaKnown RBP eCLIP3.84□□□□□ -1.8
VBP1-204ENST00000625964 THOC3Q96J01 351 aaKnown RBP3.84□□□□□ -1.8
VBP1-204ENST00000625964 FSCN3Q9NQT6 498 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 HELLSQ9NRZ9 838 aa3.84□□□□□ -1.8
VBP1-204ENST00000625964 FBXO28Q9NVF7 368 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms