RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 IL31Q6EBC2 164 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 KIAA1211LQ6NV74 962 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 CLEC17AQ6ZS10 378 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 CYP2U1Q7Z449 544 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 TMEM110Q86TL2 294 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 TMEFF1Q8IYR6 380 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 FRMD1Q8N878 549 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 DDX1Q92499 740 aaKnown RBP11.29□□□□□ -0.6
SSBP4-215ENST00000625926 AZIN2Q96A70 460 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 FAM149B1Q96BN6 582 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 SERPINB11Q96P15 392 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 TRIM62Q9BVG3 475 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 IRX2Q9BZI1 471 aaPredicted RBP11.29□□□□□ -0.6
SSBP4-215ENST00000625926 CD248Q9HCU0 757 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 ACP6Q9NPH0 428 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 RXFP3Q9NSD7 469 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 ELOVL2Q9NXB9 296 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 CALCOCO1Q9P1Z2 691 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 MBD1Q9UIS9 605 aaPredicted RBP11.29□□□□□ -0.6
SSBP4-215ENST00000625926 RAD54BQ9Y620 910 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 OBSL1O75147 1896 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 PTPRDP23468 1912 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 OTOGLQ3ZCN5 2332 aa11.29□□□□□ -0.6
SSBP4-215ENST00000625926 BECN2A8MW95 431 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 CAPN9O14815 690 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 KHNYNO15037 678 aaKnown RBP11.28□□□□□ -0.6
SSBP4-215ENST00000625926 IRAK2O43187 625 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 AP5Z1O43299 807 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 ACSL4O60488 711 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 SYNCRIPO60506 623 aaKnown RBP11.28□□□□□ -0.6
SSBP4-215ENST00000625926 IGLV3-27P01718 113 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 FYNP06241 537 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 PRKCSHP14314 528 aaPredicted RBP11.28□□□□□ -0.6
SSBP4-215ENST00000625926 NDUFV2P19404 249 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 HOXD9P28356 352 aaPredicted RBP11.28□□□□□ -0.6
SSBP4-215ENST00000625926 DPP6P42658 865 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 IL12RB1P42701 662 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 PTGER3P43115 390 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 YWHAZP63104 245 aaKnown RBP11.28□□□□□ -0.6
SSBP4-215ENST00000625926 APBA1Q02410 837 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 ARID5AQ03989 594 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 PTK2Q05397 1052 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 NNTQ13423 1086 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 ENPP2Q13822 863 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 VWA3BQ502W6 1294 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 MPP7Q5T2T1 576 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 STPG1Q5TH74 334 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 TCEAL6Q6IPX3 200 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 SLC36A4Q6YBV0 504 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 BEND5Q7L4P6 421 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 DQX1Q8TE96 717 aaKnown RBP11.28□□□□□ -0.6
SSBP4-215ENST00000625926 SHC3Q92529 594 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 PIGKQ92643 395 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 TCEAL3Q969E4 200 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 ERLEC1Q96DZ1 483 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 MRGPRX1Q96LB2 322 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 DDX50Q9BQ39 737 aaKnown RBP11.28□□□□□ -0.6
SSBP4-215ENST00000625926 TUBGCP2Q9BSJ2 902 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 CIPCQ9C0C6 399 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 NDST4Q9H3R1 872 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 DNAJC12Q9UKB3 198 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 NAALADL1Q9UQQ1 740 aa11.28□□□□□ -0.6
SSBP4-215ENST00000625926 GOLGA6L7A0A1B0GV03 622 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 E5RJQ4 531 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 PAPSS1O43252 624 aaPredicted RBP11.27□□□□□ -0.61
SSBP4-215ENST00000625926 HLA-FP30511 346 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 RPL6Q02878 288 aaKnown RBP11.27□□□□□ -0.61
SSBP4-215ENST00000625926 ZNF234Q14588 700 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 PIK3R6Q5UE93 754 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 SYPL2Q5VXT5 272 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 LYSMD4Q5XG99 296 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 TMEM215Q68D42 235 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 RNF43Q68DV7 783 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 ARMCX6Q7L4S7 300 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 METTL3Q86U44 580 aaKnown RBP11.27□□□□□ -0.61
SSBP4-215ENST00000625926 SYT12Q8IV01 421 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 ZNF557Q8N988 423 aaPredicted RBP11.27□□□□□ -0.61
SSBP4-215ENST00000625926 WFIKKN2Q8TEU8 576 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 LHX5Q9H2C1 402 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 POPDC2Q9HBU9 364 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 SIX2Q9NPC8 291 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 LMBRD1Q9NUN5 540 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 CYTH4Q9UIA0 394 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 CYP8B1Q9UNU6 501 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 PLA2G4CQ9UP65 541 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 TLR6Q9Y2C9 796 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 ZNF292O60281 2723 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 GREB1Q4ZG55 1949 aa11.27□□□□□ -0.61
SSBP4-215ENST00000625926 IGHV1OR15-9A0A0B4J2B8 117 aa11.26□□□□□ -0.61
SSBP4-215ENST00000625926 TYW5A2RUC4 315 aaKnown RBP11.26□□□□□ -0.61
SSBP4-215ENST00000625926 KCNJ18B7U540 433 aa11.26□□□□□ -0.61
SSBP4-215ENST00000625926 FOXN3O00409 490 aaPredicted RBP11.26□□□□□ -0.61
SSBP4-215ENST00000625926 TM4SF5O14894 197 aa11.26□□□□□ -0.61
SSBP4-215ENST00000625926 TBL1XO60907 577 aa11.26□□□□□ -0.61
SSBP4-215ENST00000625926 PABPC1P11940 636 aaKnown RBP11.26□□□□□ -0.61
SSBP4-215ENST00000625926 SLC6A4P31645 630 aa11.26□□□□□ -0.61
SSBP4-215ENST00000625926 KRT9P35527 623 aa11.26□□□□□ -0.61
SSBP4-215ENST00000625926 SNX16P57768 344 aa11.26□□□□□ -0.61
SSBP4-215ENST00000625926 PDCLQ13371 301 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms