RNA–Protein interactions for RNA: ENST00000625916.1

SCN1A-208, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-208ENST00000625916 FMO1Q01740 532 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 MTAPQ13126 283 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 GAB1Q13480 694 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 AASDHQ4L235 1098 aaPredicted RBP3.43□□□□□ -1.86
SCN1A-208ENST00000625916 PIK3CD-AS1Q5SR53 167 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 DHRS13Q6UX07 377 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 EPM2AIP1Q7L775 607 aaPredicted RBP3.43□□□□□ -1.86
SCN1A-208ENST00000625916 ELP5Q8TE02 316 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 TMEM174Q8WUU8 243 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 GATA5Q9BWX5 397 aaPredicted RBP3.43□□□□□ -1.86
SCN1A-208ENST00000625916 TRIM2Q9C040 744 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 CD93Q9NPY3 652 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 UTS2RQ9UKP6 389 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 MYO6Q9UM54 1294 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 INSL5Q9Y5Q6 135 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 EVPLQ92817 2033 aa3.43□□□□□ -1.86
SCN1A-208ENST00000625916 CADPSQ9ULU8 1353 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 DPPA5A6NC42 116 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 GRID2O43424 1007 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 AKR1A1P14550 325 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 DRD1P21728 446 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 PBX1P40424 430 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 BFSP2Q13515 415 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 ACOX1Q15067 660 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 SLC4A8Q2Y0W8 1093 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 GLE1Q53GS7 698 aaKnown RBP3.42□□□□□ -1.86
SCN1A-208ENST00000625916 LIPMQ5VYY2 423 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 ISM2Q6H9L7 571 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 TRILQ7L0X0 811 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 MORC1Q86VD1 984 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 KIAA0319LQ8IZA0 1049 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 ARL14EPQ8N8R7 260 aaPredicted RBP3.42□□□□□ -1.86
SCN1A-208ENST00000625916 GJA10Q969M2 543 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 SLITRK1Q96PX8 696 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 WDR83Q9BRX9 315 aaKnown RBP3.42□□□□□ -1.86
SCN1A-208ENST00000625916 SELENOOQ9BVL4 669 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 RTFDC1Q9BY42 306 aaPredicted RBP3.42□□□□□ -1.86
SCN1A-208ENST00000625916 SLC25A32Q9H2D1 315 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 ZNF287Q9HBT7 754 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 PLSCR4Q9NRQ2 329 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 PLK2Q9NYY3 685 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 ZNF212Q9UDV6 495 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 ICAM5Q9UMF0 924 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 EMSYQ7Z589 1322 aa3.42□□□□□ -1.86
SCN1A-208ENST00000625916 LINC01565O15544 149 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 ENO1P06733 434 aaKnown RBP3.41□□□□□ -1.86
SCN1A-208ENST00000625916 MATN1P21941 496 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 CIITAP33076 1130 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 IGHMBP2P38935 993 aaKnown RBP3.41□□□□□ -1.86
SCN1A-208ENST00000625916 RAB27AP51159 221 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 DSCR9P59020 149 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 MCL1Q07820 350 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 KCNJ12Q14500 433 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 PGM5Q15124 567 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 TTF1Q15361 905 aaPredicted RBP3.41□□□□□ -1.86
SCN1A-208ENST00000625916 ANXA2RQ3ZCQ2 193 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 TTLL5Q6EMB2 1281 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 ZNF329Q86UD4 541 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 TMPRSS12Q86WS5 348 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 RHPN2Q8IUC4 686 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 DDIASQ8IXT1 998 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 SUN3Q8TAQ9 357 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 WFIKKN2Q8TEU8 576 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 FAM227BQ96M60 508 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 ELOVL1Q9BW60 279 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 SEZ6LQ9BYH1 1024 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 LRRC27Q9C0I9 530 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 TASP1Q9H6P5 420 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 TBC1D23Q9NUY8 699 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 RGS17Q9UGC6 210 aaPredicted RBP3.41□□□□□ -1.86
SCN1A-208ENST00000625916 ERRFI1Q9UJM3 462 aaPredicted RBP3.41□□□□□ -1.86
SCN1A-208ENST00000625916 CAPN11Q9UMQ6 739 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 L1RE1Q9UN81 338 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 SPATA31A5Q5VU36 1347 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 SPATA31A7Q8IWB4 1347 aa3.41□□□□□ -1.86
SCN1A-208ENST00000625916 PODXLO00592 558 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 ZNF432O94892 652 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 HOXC6P09630 235 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 IBSPP21815 317 aaPredicted RBP3.4□□□□□ -1.87
SCN1A-208ENST00000625916 RFX2P48378 723 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 ZNF84P51523 738 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 CACNB3P54284 484 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 IZUMO4Q1ZYL8 232 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 INO80DQ53TQ3 878 aaPredicted RBP3.4□□□□□ -1.87
SCN1A-208ENST00000625916 WASHC2DQ5SRD0 308 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 PRAMEF19Q5SWL8 479 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 KYAT3Q6YP21 454 aaKnown RBP3.4□□□□□ -1.87
SCN1A-208ENST00000625916 SRGAP1Q7Z6B7 1085 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 RBM23Q86U06 439 aaKnown RBP3.4□□□□□ -1.87
SCN1A-208ENST00000625916 SESTD1Q86VW0 696 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 SDR16C5Q8N3Y7 309 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 LMO3Q8TAP4 145 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 ZNF845Q96IR2 970 aaPredicted RBP3.4□□□□□ -1.87
SCN1A-208ENST00000625916 TM6SF1Q9BZW5 370 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 C6orf106Q9H6K1 298 aaPredicted RBP3.4□□□□□ -1.87
SCN1A-208ENST00000625916 ERVK-5Q9HDB9 667 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 SLC8A2Q9UPR5 921 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 PCDHGB1Q9Y5G3 927 aa3.4□□□□□ -1.87
SCN1A-208ENST00000625916 RHODO00212 210 aa3.39□□□□□ -1.87
SCN1A-208ENST00000625916 IFNA2P01563 188 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms